Garra rufa (doctor fish): 141343281
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Entry
141343281 CDS
T11039
Name
(RefSeq) glutamate receptor ionotropic, kainate 2
KO
K05202
glutamate receptor, ionotropic kainate 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf04080
Neuroactive ligand-receptor interaction
grf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
141343281
04082 Neuroactive ligand signaling
141343281
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141343281
Ion channels [BR:
grf04040
]
Ligand-gated channels
Glutamate (ionotropic)
141343281
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Ortholog
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
YebG
Motif
Other DBs
NCBI-GeneID:
141343281
NCBI-ProteinID:
XP_073703977
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All DBs
Position
9:47301791..47534348
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AA seq
864 aa
AA seq
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MQCIAGIMKMCSPLVTHQRWLGLLLLLLCVGYSHGMPHVLRFGGIFESIESGPSGAEELA
FKFALNTINRNRTLLPNTTLTYDIQRINIHDSFEASRKACDQLSLGVAAIFGPSHSSSAN
AVQSICNALGVPHIQTKWKHQVSDNRDSFYVSLYPDFSSLSRAILDLVHFFKWKTVTVVY
DDSTGLIRLQELIKAPSRYNIRLKIRQLPAETKDAKPLLKEMKRGKEFHVIFDCGHEMAA
GILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENSQVSSIIEKW
SMERLQAPPKPDSGLLDGFMTAHWDGLTGRINFNRTNGLRTDFDLDVISLKEEGLEKIGT
WDPVSGLNMTENQKGKAANVTDSLSNRSLVVSTILEEPYVMFKKSDKPLYGNDRFEGYCI
DLLRELAAILGFTYEVRLVEDGKYGAQEESTGQWNGMVRELMDHKADLAVAPLAITYVRE
KVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARF
SPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFT
LIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGVVEDGATMTFFKKTKISTYDK
MWEFMSSRRHSVMVKSIEEGIERVLTSDYAFLMESTTIEFATQRNCNLTQIGGLIDSKAY
GVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEENKEASALGVQNIGGIF
IVLAAGLVLSVFVAVGEFLYKSKQNAQLEKRSFCSAMVDELRVSLKCQRRLKHKPQPPVM
VKTDEVINMHTFNDRRLPGKETMA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcatcgcaggcatcatgaagatgtgctctcctctggtaactcatcagagatgg
cttgggctgttgctgctcttactgtgtgtgggatattctcacggcatgccacatgtgtta
agattcggggggatatttgaatccatcgaaagtggcccatctggtgctgaagaacttgcc
tttaagtttgctttaaatacaatcaacaggaacagaactttactgccaaacaccacactt
acatacgacatccaaaggataaacatccacgacagctttgaggcctccagaaaagcttgt
gaccagctctctctgggtgtggcggccatcttcggtccctcccacagttcttcggccaat
gcggtgcagtccatctgtaacgctctgggggtgccgcacatccagaccaagtggaagcac
caagtttcagacaaccgtgattccttctacgtcagcctttacccagacttctcctccctc
agcagagccattttagacttggttcacttcttcaagtggaaaacggtcactgtggtttac
gatgacagcacaggtctgattcgattacaggagctcatcaaggctccatctcgttacaac
atccgattaaaaatccggcagctaccagcagaaacaaaagatgccaagccccttcttaaa
gaaatgaaacgaggaaaagagttccatgtgatctttgactgtggtcatgaaatggcagct
ggcatccttaaacaggcgcttgccatgggaatgatgacagagtattaccactacattttt
actaccctggatctcttcgcattggatgtggagccctatcgctacagcggggtcaacatg
acaggattccgtatcctaaacacagagaacagccaggtgtcctccatcatcgaaaagtgg
tccatggagcgtctgcaggcgcctcctaaaccagactctggcctgctggatggtttcatg
acagcccactgggacgggttgactggacggataaatttcaacaggaccaacggcctgagg
acagatttcgatctggatgtgatcagcctgaaggaagaggggctagagaagattgggaca
tgggatcctgtgagtggtttaaacatgacagaaaaccagaaaggaaaagcagccaatgtg
acggattctctctcaaacagatcgctggtggtgtccactatactggaagagccttacgtg
atgttcaagaagtcggataagccgctatacggtaacgatcgcttcgaaggctactgcatc
gacctgctgcgagagctggctgccatcctgggcttcacctacgaggtgcgactggtggag
gatggcaagtatggagcgcaagaagagagcacaggccagtggaacggcatggtccgagaa
ctgatggaccataaagctgatcttgcagtggcgcccctggccatcacgtacgtgcgggag
aaggtcatcgacttttccaaacccttcatgacgctggggataagtatactgtaccgcaaa
cccaacggcaccaacccaggggtgttctcctttctcaaccccctgtcccccgacatctgg
atgtatattctgctcgcttacttgggtgtcagttgtgtgctgtttgtcatagccaggttt
agcccctacgaatggtataacccccacccgtgcaaccccgactcggacgtggtggaaaac
aatttcaccctgctaaatagtttctggttcggagttggagctctcatgcagcaaggatct
gagctcatgcccaaagccctttccaccaggatagtaggaggcatctggtggttttttacc
ctaatcatcatctcctcctacacggccaacctagccgcctttcttaccgtggagagaatg
gaatctccaattgactcggctgatgacctggccaagcagaccaagattgagtatggagtg
gtggaggatggcgctacaatgaccttctttaagaaaacaaagatctctacgtatgataag
atgtgggagttcatgagcagtcgaagacattcggtcatggtcaagagcatcgaggaagga
atcgagcgtgtgctcacctccgattatgccttccttatggagtccaccaccatcgaattt
gccactcagcgcaactgcaacctcacgcagatcggaggcctcatagactccaaggcctac
ggggtcggcaccccaatggggtccccgtaccgagataagatcaccatcgcaatcctgcag
ctacaggaagaagggaagctgcacatgatgaaggagaagtggtggcgaggaaatggctgt
cctgaggaggagaataaagaggccagtgcgctgggcgtccagaacatcggtggcattttc
atagtgttggccgcgggactcgtcctctctgtatttgtggcagttggggagtttctctat
aagtccaaacaaaacgcacagctggaaaagagatccttctgcagcgccatggtggacgag
ctacgggtttccctcaagtgccaacgccggctcaaacacaagccgcagccgcccgtcatg
gtcaaaacggatgaagtcatcaacatgcacaccttcaatgaccgaagactgccaggcaaa
gagaccatggcttaa
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