Garra rufa (doctor fish): 141344280
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Entry
141344280 CDS
T11039
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04020
Calcium signaling pathway
grf04510
Focal adhesion
grf04540
Gap junction
grf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141344280 (pdgfab)
04020 Calcium signaling pathway
141344280 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141344280 (pdgfab)
04540 Gap junction
141344280 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
141344280 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
grf04052
]
141344280 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
grf00536
]
141344280 (pdgfab)
Cytokines and neuropeptides [BR:
grf04052
]
Cytokines
Growth factors (RTK binding)
141344280 (pdgfab)
Glycosaminoglycan binding proteins [BR:
grf00536
]
Heparan sulfate / Heparin
Growth factors/receptors
141344280 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
LOH1CR12
Motif
Other DBs
NCBI-GeneID:
141344280
NCBI-ProteinID:
XP_073705220
LinkDB
All DBs
Position
1:23124057..23156686
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AA seq
230 aa
AA seq
DB search
MRTLFCCFLLLTSHLLLATAEKEFAIPQDFIDRLSHSEINSISDLQRLLEVNSPGPGNEV
IEEVKQKHHQKSHHSYKAASSDLKSLQLSHRRKRSVVEEAVPAMCKTRTVIYEIPRSQVD
PTAANFLIWPPCVEVKRCTGCCNTGNMRCHPSKKQHRTVKVAKVEFASRKKAKLKEVLVR
LEDHLECVCTSQHHVIEHAEADTGPRTVKKGKKRKHRKQAVAAQINKDIQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccttattctgctgctttctgctcctcacctcgcaccttctgctggcaactgct
gagaaggagtttgcaatccctcaagatttcatcgacagactgtcccacagcgaaatcaac
agcatcagcgacctccagcggctactggaggtaaattccccaggtcctggaaatgaggtg
attgaggaggtcaaacagaagcaccatcagaagagccatcactcatacaaggccgcttcc
tcagatctcaagagcctgcagctgtcccacagacggaagaggagtgtcgtagaggaagcg
gtgcccgccatgtgcaagacacggacagtgatctacgagatcccccgcagtcaagtggat
cccaccgctgcaaacttcctaatatggcctccgtgtgtggaggtgaaacgctgtacaggc
tgctgcaacaccggcaacatgcgctgtcacccctccaaaaaacagcaccgtactgtcaag
gtggcgaaggtagagtttgcatcgcgtaagaaagcgaaattgaaggaggtgctcgtccgg
ttagaggatcatttggaatgtgtgtgcacatcacagcatcacgtgatcgagcacgcagaa
gcagacacaggcccacgcacagttaaaaaaggtaaaaaacggaaacacagaaagcaagca
gtggcagcacagatcaacaaggatattcaataa
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