Garra rufa (doctor fish): 141345084
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Entry
141345084 CDS
T11039
Symbol
hdc
Name
(RefSeq) histidine decarboxylase
KO
K01590
histidine decarboxylase [EC:
4.1.1.22
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00340
Histidine metabolism
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09105 Amino acid metabolism
00340 Histidine metabolism
141345084 (hdc)
Enzymes [BR:
grf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.22 histidine decarboxylase
141345084 (hdc)
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
141345084
NCBI-ProteinID:
XP_073706039
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Position
11:49551390..49558822
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AA seq
623 aa
AA seq
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MQAQEYAMRGKEMVDFIQQYLTQIRERRVVPDVQPGFMRPLLPSSAPFEPDDWSSIMRDV
ENIILPGVVHWQSPHMHAYFPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMCVLD
WLCKALGLPDHYLHHHPQSNGGGILQSTVSECTLVALLTARKDRILQMKTEFTHADTDES
VLNSRLIAYASDQAHSSVEKAGLISLVKIRFLETDEAFSLRGETLQRAIDEDRRRGLVPV
MLCATLGSTGVCSFDRLDELGPICAREGLWLHVDAAYAGSALLCPELRYFLNGIEFADSF
VFNPSKWMMVHFDCTAFWVKNKMKLQQTFTVDPLYLRHENSDATDFMHWQISLSRRFRSL
KLWFVMRSFGLKNLQAHIRHSVEMAKLFESLVRNDTNFQIPAQRHLGLVVFCLRAGNGPT
QELLRKLTKSGQMFLIPAAIGNKLIIRFTVTSQFTSAEDIQRDWSLIRQTAKEVLRSCSL
TRQPSIISDESFEENREDAPLTIHAELSRMRLEPMIDERLVRQGQRRAIRSLSCGAELPP
ARPERAPPQRDAPLEQIPERPPPAQHRTQKRLLKFHSVPSLSQVWAQCGMQQLYHPFRRG
WVTSRASCFNCFPLAETSPLPTK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcaggagtacgcgatgagagggaaggagatggtggatttcatccagcagtat
ctcacacagatccgtgagcggcgggtcgttccagacgttcagccgggtttcatgcgtcct
ctgctgcccagcagcgccccgtttgagccggacgactggagcagcatcatgcgggacgtg
gagaacatcatcctgcctggggttgttcattggcagagtcctcacatgcatgcatatttc
cctgcgctcacctcatggccatctctgctgggagacatgctggcagacgccatcaactgc
ctcggcttcacctgggcttctagtccagcatgcactgagctggagatgtgtgtgttagac
tggttgtgtaaggcgcttgggttgccagatcattatttacaccatcatccacagagcaac
ggaggaggaatcctgcagagtacggtcagcgagtgcactctggtcgctctgctcaccgcg
aggaaggaccgaatcctgcagatgaagactgaattcacacacgccgacacggacgagtca
gtgctgaactccagactcatcgcctacgcctccgaccaggctcattcgtcagtggagaag
gccggtctgatctctctggtgaagatcaggttcctggagacggacgaggcgttttctctg
cgtggagaaactcttcagcgcgccatcgacgaggaccgcaggagaggtttggtaccagtg
atgctgtgcgccacgctcggatccaccggagtgtgttcctttgaccgtctggatgaactc
ggccccatctgtgcgcgtgagggtctctggctgcacgtggatgcggcgtacgcaggttct
gctctgctgtgtcctgaactgcgatattttctcaacggaatcgagtttgcagattcattc
gtcttcaacccatccaagtggatgatggtccatttcgactgtacggcgttctgggtgaag
aataagatgaagctccagcagacgttcaccgtcgacccgctttacctgagacacgagaac
tcagacgccactgacttcatgcactggcagatctctctgagtcgccgctttcgctctctg
aagctgtggtttgtgatgcgctccttcggtctgaagaacctgcaggctcacattcgacac
agcgtggagatggcaaagctgttcgagtctctagtcagaaacgacacaaacttccagatc
ccagcgcagcggcacctcggcctggtcgtcttctgcttacgagctggaaacggaccgacg
caggagttactgcggaaactgactaaatcggggcagatgtttctgattccggccgccatc
gggaacaaactcatcatccgcttcaccgtgacgtcccagttcaccagcgccgaggacatc
cagagggactggagcctgatccggcagacggccaaagaggtgctgcgctcctgctctctc
acgcgccagcccagcatcatctcagacgagagcttcgaggagaaccgagaggacgcgccg
ctcaccatccacgccgagctgagccgaatgcgtctggagcccatgatagacgagcgtctg
gttcgacagggccaaagacgggccatccgttccctgagctgcggcgccgaactgcccccc
gcccgacccgagcgcgcaccgccgcagagagacgccccgctggagcagatccccgagcgg
ccgccgccggcgcagcacaggacgcagaagcgtctgctgaagttccacagcgtgcccagc
ctgtcgcaggtgtgggcgcagtgcggcatgcagcagctctaccaccccttcagacgagga
tgggtcaccagcagggccagctgcttcaactgcttccctctagccgaaaccagcccgctg
cccaccaaataa
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