Garra rufa (doctor fish): 141345347
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Entry
141345347 CDS
T11039
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04260
Cardiac muscle contraction
grf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141345347
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
141345347
04261 Adrenergic signaling in cardiomyocytes
141345347
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141345347
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
141345347
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_3
VWA_2
Cache_3-Cache_2
VWA_CoxE
DUF2201
Motif
Other DBs
NCBI-GeneID:
141345347
NCBI-ProteinID:
XP_073706309
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Position
11:complement(38574214..38796157)
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AA seq
1057 aa
AA seq
DB search
MATPALMEKISCSLIVSRIKEWVDQLQQELVSLADTASAGNNLRQIFMDNQNYFTVKTNN
AAQLVETAARNIENFLKKRAAALETLATAAENFQMEHQWKDEFEEDDIVYYNAKDNLDAN
ETEGRKNRIRPEFKEDPSFKNRLTSYSHTAVHIPTDIYDGSTIVLNELNWTEALEDVFKR
NREEDPTLLWQVFGSATGLARYYPASPWMDARKTPSKIDLYDVRRRPWYVQGAASPKDML
ILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVHFNTKVNNTACFDHLVQANVRNK
KILKDAVQNITAKGITNYTKGFEFAFNQLSNPNISRANCNKIIMLFTDGGEERAEEIFSR
YNLDKKVRVFTFSVGQHNYDTGPIKWMACANKGYFYEIPSIGAIRINTQEYLDVLGRPMV
LADAKQVQWTNVYLDALELGLVITGTLPVFNKTKSRVGGSRNQHQNQLILGVMGVDVSLD
DIKRLTPRFSIGPNGYYFAIDPNGYVLLHPNLQPKNPKFQEPVTLDFLDAELENDIKVQI
RTLMIDRDPGEKTIETLVKSQDERYIDRGIRTYTWAPVNGTDYSLALVLPEYSLHYIEAN
LGDTIKQAMSFETMEQEKFEEYGYTFIAPREYCKDLKVLTNNTQFLLDFNEYINRKTPND
PMCNVTLVNRLLLDAGLTADLIKVWKEQSVDGVLARFVATDGGITRVYPKSAGEEWGENS
ETYDSSFYKRSLDNDIYIFTAPYLNKSRESGYEAGILVSKAVDLDINGAKLKPAVVGVKL
NVSAWMNSFINATTKKNCKDEICGCLRNDKQVDCVILDDGGFLLMSNQDEYITQIGQFFG
EVDPVLMITLVNTSLFSFNKTYDYQSVCDPERETKAAAGPRSVYVPTIADMLTVGWWAST
AVWSVLQQLLLSLTLPNIVGTAYSEDDLSDAFSKESCITEQTQYFFENENKSFSGAMDCG
NCSRMYRAEKLPNTNLVFLISDAKSSCLSCDPKPLRQAEQPSIGPDPCVLTQNPRYRKGP
DVCFDNNIDDEPLCSISGSSSLTYYLPIILLLFLLCV
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggccacacccgctcttatggaaaagataagctgttcgctgattgtatccaggataaaa
gaatgggtagatcaactgcagcaggagctggtttctctagcagacacagccagcgctggg
aataatctaagacagatctttatggataatcagaattatttcactgtgaaaacaaataat
gcggcacagcttgtggaaacagcggcacggaatatagaaaattttttgaagaagcgagcc
gcggctttagagactttggcaaccgcagcagagaatttccaaatggagcatcaatggaaa
gatgaatttgaagaggatgatatagtttactataatgccaaggataatcttgatgccaat
gaaacagaaggaaggaaaaaccggatcagacctgaatttaaagaagacccgtcattcaaa
aaccgcctcacctcctacagccatacggctgtgcatatccccacggacatatatgacggc
tccactattgtgttgaatgagctgaactggactgaagcactggaagacgtctttaagaga
aaccgagaagaggatccaacgctactatggcaagtgtttggcagtgctactgggttagct
cgctattacccagcttccccttggatggatgccaggaaaacacccagtaaaatcgacctg
tatgatgtgcgccggcgaccttggtatgttcaaggtgccgcttctcccaaggacatgctg
attcttgttgatgcgagtgggagtgtgtctggactgacccttaaactcatccgaacctct
gtcagcgaaatgctggagacgctttccgatgatgattatgtcaacgttgtccattttaac
acaaaagtgaataacacagcatgtttcgaccacctggttcaagctaatgttcgcaataag
aagatcttaaaggatgcagtccagaacatcacagccaaaggcatcaccaactacaccaaa
ggatttgaatttgccttcaatcagctctcaaatccaaacatctcaagagcaaactgcaac
aagatcataatgctgtttactgatggaggcgaggagagggcagaggagatcttcagcaga
tacaaccttgacaaaaaggtacgtgtgttcacattttctgtgggtcaacacaactatgac
actggaccaataaagtggatggcctgcgctaataagggatatttctacgaaattccatcc
attggagccattcgcataaacacacaggagtatctagatgttttgggcagaccaatggtc
cttgcagatgccaaacaagtgcagtggaccaacgtgtacctggacgctctagagttgggc
ctagtcatcacaggcacactacctgtgttcaacaagaccaaatccagggtgggcggatct
cgaaaccagcatcagaaccagttgattttaggagtgatgggggtggatgtgtctcttgat
gatataaaaagactgacgccccgcttctcaattggtcctaatggatattattttgcaatc
gatcctaacggttacgtcctgcttcatccaaacctgcaaccaaagaaccccaaattccag
gagccggttacactggatttcctagatgcggagctggaaaatgatattaaagtccagata
cgcactctgatgattgacagagaccctggggagaaaacaatagaaacgcttgtgaaatct
caagatgagagatacattgatcgaggaatcaggacgtacacctgggcaccggttaacggg
acggactacagcctggccttggttttgcctgaatacagtctgcattacatcgaggcgaac
ctgggggacactataaaacaagccatgtcctttgaaaccatggagcaggagaaatttgag
gaatatgggtacacctttattgcacctagggaatactgcaaggacctcaaagtcttaacc
aacaacacccagttcctgctagacttcaatgagtacattaacaggaaaacaccgaatgat
cccatgtgtaatgtcactcttgtaaaccggttgctgctggacgccggtctcacggcagac
ctcatcaaagtctggaaggagcagagtgtagatggagttttggcccggtttgtggctaca
gatggagggattacacgtgtatatcctaaaagtgctggggaagaatggggtgaaaactca
gagacctatgactcaagtttttacaaaaggagtctggacaacgacatatacatcttcacc
gccccatacctcaacaagagcagagagtctggttatgaggccgggatccttgtcagtaaa
gcagtggacttggacattaatggagcaaaactcaaacctgccgtggtgggagtcaaactc
aacgtgtctgcctggatgaacagcttcataaatgctaccaccaagaaaaattgcaaggat
gagatctgcgggtgcctcagaaatgataagcaagtggactgtgtgattctggacgatggt
ggatttctcctcatgtccaatcaggatgaatatatcacacagataggtcagttctttggt
gaagtggatcctgttttgatgatcactctggtcaacacctcactcttctcctttaataaa
acctacgactaccaatccgtctgcgatccggagagagaaactaaagctgctgctggaccc
cgctctgtatatgtgccaacgatagcagatatgctgactgtaggctggtgggcctccact
gcggtctggtcagtcttgcaacagctacttctcagtctgactctgccaaatattgtggga
acagcgtactcggaggatgacctttcggatgcgttctccaaagagagctgtatcaccgag
cagactcagtatttctttgagaacgagaacaaatctttctctggagccatggactgtgga
aactgctccaggatgtaccgggcggagaagcttccaaacacaaatttggtttttctgatc
tctgacgcaaagagttcctgcctgtcctgcgatcctaaaccgctgagacaagctgagcag
ccctctattggtcctgatccatgtgtgctgacccagaaccctcggtacaggaaaggacca
gacgtctgctttgacaacaacatagatgatgagcctttgtgttcaatcagtggctcttct
tctttgacctattacctgcccatcattttgctgctgtttctgctttgtgtttga
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