Garra rufa (doctor fish): 141346197
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Entry
141346197 CDS
T11039
Symbol
ctsd
Name
(RefSeq) cathepsin D
KO
K01379
cathepsin D [EC:
3.4.23.5
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04140
Autophagy - animal
grf04142
Lysosome
grf04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
141346197 (ctsd)
04140 Autophagy - animal
141346197 (ctsd)
09143 Cell growth and death
04210 Apoptosis
141346197 (ctsd)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
grf01002
]
141346197 (ctsd)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141346197 (ctsd)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.23 Aspartic endopeptidases
3.4.23.5 cathepsin D
141346197 (ctsd)
Peptidases and inhibitors [BR:
grf01002
]
Aspartic peptidases
Family A1: pepsin family
141346197 (ctsd)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141346197 (ctsd)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp
TAXi_N
A1_Propeptide
TAXi_C
Motif
Other DBs
NCBI-GeneID:
141346197
NCBI-ProteinID:
XP_073707206
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All DBs
Position
11:complement(33448521..33459144)
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AA seq
396 aa
AA seq
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MRIVCLLLAAAFLWTSDALVRIPLNKFRSIRRTLSDSGRAVEELLAGSVPLKYNQGFPAS
NGPTPETLKNYLDAQYYGEIGLGTPVQTFTVVFDTGSSNLWVPSVHCSLTDIACLLHHKY
NGGKSTTYVKNGTEFAIQYGSGSLSGYLSQDTCTIGDIAVEKQIFGEAIKQPGVAFIAAK
FDGILGMAYPRIAVDGVPPVFDMMMSQKKVEKNVFSFYLNRNPDTQPGGELLLGGTDPKY
YTGDFNYVGISRQAYWQIHMDGMSIGSELTLCKGGCEAIVDTGTSLITGPAAEVKALQKA
IGAIPLIQGEYMVDCKKVPTLPTISFVLGGKTYSLTGEQYILKESQAGKDICLSGFMALD
IPPPAGPLWILGDVFIGQYYTVFDRENNRVGFAKSV
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgtctgcctgctgctagctgctgcctttttgtggacgtccgacgcgcttgtt
cggattcctttaaataaatttcgttccatcagacggacactgagtgactctggtagagct
gtagaggagcttttggctggttctgtacccctgaaatacaaccagggcttcccagcaagt
aatggtcctactccagaaaccctcaagaactatcttgatgctcagtactatggagagatc
ggtcttggcactcctgtccagaccttcactgtggtgtttgacactggatcctccaacctg
tgggtgccctctgtccactgttccctgactgacattgcctgcttgcttcatcacaaatac
aatgggggcaagtcgaccacctatgtgaagaacgggactgaatttgccatacagtatgga
tctggaagcttgtctggttatctcagccaggacacatgcacgattggggatattgcggtt
gagaagcagatatttggagaagctatcaaacagccaggagtggccttcatcgcagccaag
tttgatggtattctcggcatggcttatcctcgcatcgccgtagatggggttcctcctgtt
tttgacatgatgatgagccagaagaaagtggagaaaaatgttttctctttttatctgaac
agaaaccctgacacccaacctggtggtgagctgctccttggaggtacagaccccaaatat
tacactggagactttaactacgtgggcatcagcagacaggcctattggcagattcacatg
gatggcatgagcatcggaagcgagctgactctgtgtaaaggaggatgtgaagccatcgtt
gacactgggacgtctctgatcaccggcccagccgctgaagtcaaagccctgcagaaggct
atcggtgcaatccctctgatccagggagagtatatggtggactgtaagaaagtgcccaca
ctccccacaatctcatttgtccttggtggaaagacttactccctgactggagaacagtac
atactcaaggaaagccaggctggaaaggatatctgtctgagtggattcatggccctggac
atcccaccccccgctggacctctgtggattctgggtgatgtgttcattgggcagtactac
actgtgtttgatcgggagaataaccgagtgggctttgctaagtctgtataa
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