Gordonia rubripertincta: GCWB2_02520
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Entry
GCWB2_02520 CDS
T05629
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gru
Gordonia rubripertincta
Pathway
gru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCWB2_02520 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gru03400
]
GCWB2_02520 (pdg)
Enzymes [BR:
gru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GCWB2_02520 (pdg)
DNA repair and recombination proteins [BR:
gru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GCWB2_02520 (pdg)
Prokaryotic type
GCWB2_02520 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ASR01333
UniProt:
A0AAW6RB62
LinkDB
All DBs
Position
551060..551863
Genome browser
AA seq
267 aa
AA seq
DB search
MQDIANLNHVSARKAASVGEAPARKQETHLGLVRRARRMNRTLKVAFPHVYCELDFTNPL
ELSVATILSAQCTDVRVNQTTPALFAKYRTARDYAEADRIELEEMIRSTGFYRNKANSII
GLGQALVERYDGEVPNNLKDLVSLPGFGRKTANVVLGNAFGVPGITVDTHFGRLVRRWQW
TEEEDPVKVEHAVGELIERKEWTDLSHRVIFHGRRVCHARKPACGVCILAKDCPSVGTGP
MDKAEAAALVKGPETEHLLRLAGLAAP
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggacatcgctaacctgaatcacgtgagcgcacgtaaggctgcgtccgtgggcgag
gccccggctcgcaagcaggagacccacctcgggctggtccgacgcgcgcgccggatgaac
cgcaccctcaaggtcgcgttcccgcatgtgtactgcgaactcgacttcaccaacccgctc
gagctgtcggtggccaccatcctgtcggctcagtgcaccgatgtgcgggtcaaccagacc
accccggcgctcttcgcgaagtaccgcaccgcccgcgattacgcagaggccgaccgcatc
gaactcgaggagatgatccgctcgaccggtttctaccggaacaaggcgaactcgatcatc
ggactcggccaggcgctcgtcgagcggtacgacggcgaggtcccgaacaatttgaaggac
ttggtgtcgctgcccggtttcggccgcaagacggccaacgtcgtcctgggcaacgcattc
ggggtccccgggatcaccgtggacacccacttcggccgcctcgtccgacgctggcagtgg
accgaggaagaagatccggtgaaggtcgaacacgccgtcggcgagctgatcgagcgcaag
gagtggaccgacctgtcccaccgcgtgatcttccacggccggcgtgtgtgccatgcccgc
aagccggcgtgcggggtctgcatcctcgccaaggactgcccgtcggtgggcacgggcccg
atggacaaggccgaggccgcagcgctggtcaagggccccgagaccgagcacctcctccga
ctggccggactagccgccccgtga
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