Gordonia rubripertincta: GCWB2_13115
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Entry
GCWB2_13115 CDS
T05629
Symbol
metH
Name
(GenBank) Methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00270
Cysteine and methionine metabolism
gru00450
Selenocompound metabolism
gru00670
One carbon pool by folate
gru01100
Metabolic pathways
gru01110
Biosynthesis of secondary metabolites
gru01230
Biosynthesis of amino acids
gru04980
Cobalamin transport and metabolism
gru04981
Folate transport and metabolism
Module
gru_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GCWB2_13115 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GCWB2_13115 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GCWB2_13115 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GCWB2_13115 (metH)
04980 Cobalamin transport and metabolism
GCWB2_13115 (metH)
Enzymes [BR:
gru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
GCWB2_13115 (metH)
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Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Pterin_bind
Met_synt_B12
B12-binding_2
B12-binding
CdhD
Motif
Other DBs
NCBI-ProteinID:
ASR03420
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All DBs
Position
complement(2882456..2886046)
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AA seq
1196 aa
AA seq
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MSFENSGHRPSDFDTTFMSSMSRRVLIGDGAMGTMLQAADLTLDDFNQLEGCNEILNDTR
PDVLEGIHRAYFEAGADAVETNTFGCNLSNLGDYDIADRIRELAYKGTAIARGVADEMGP
SADGIDRYVLGSMGPGTKLPSLGHTTFAVIRDAYTECVIGMLEGGADAVLIETSQDLLQV
KAAVIAAQRAMDQVGRRIPIISHVTVETTGTMLLGSEIGAALAAIEPLGVDLIGLNCATG
PAEMSEHLRYLSKHARIPVSVMPNAGLPVLGANGAEYPLTPEELAESMAQFVGEFGLSFV
GGCCGTTPEHIRQVAEAVAQVTPATRAPQHEPETSSLYTAVPFDQDASFLVIGERTNTNG
SKAFREAMIAEDYQKCLDIAKDQTRDGAHMLDLNVDYVGRDGAADMTALASRFATSSTLP
IMLDSTEPEVIRAGLEALGGRCAVNSVNYEDGDGPDSRFNKIMRLVVEHGAAVVALTIDE
EGQARTADWKVRVAERLIDDITGNWGLAEEDIIIDALTFPISTGQEEVRRDGIETIEAIR
RLHESHPDVHFTLGISNISFGLNPAARQVLNSVFLHECVQAGLDTAIVHASKILPMARIP
EEHRQVALDLVYDRRREGYDPLQKLMELFEGVSAASARESRAQELAQLPLFERLERRIVD
GERNGLTDDLDEAMTQVPPLSIINDTLLSGMKTVGELFGSGQMQLPFVLQSAEVMKAAVA
HLEPHMEATGEDGKGRIVLATVKGDVHDIGKNLVDIILSNNGYEVVNIGIKQPITTILDV
AADKKADVIGMSGLLVKSTVVMKENLEEINTRGLAEEYPVLLGGAALTRSYVENDLSEVY
EGDVHYARDAFEGLRLMDDIMARKRGGGPDPDSDEAKAEAAKTAERKARHERSKRIAAKR
KAAEEPVVVPARSDVAADNEIPTPPFWGSRIVKGVPIADYLQLLDERALFLGQWGLRGAR
GGDGPSYEELVESEGRPRLRYWIDRLATENILQHAAVVYGYYPAVSEGDTVHVLTEPDPD
APVRFSFSFPRQQRSRFLCIADFIQSREAAKAAGRVDVMPFQLVTMGQPIADFANKLFAE
DAYRDYLEVHGIGVQLTEALAEYWHQRVRSELKFGDRSMDSEDPEHAQGFFDLEYRGARF
SFGYGACPDLEDRAKMIELLEPERIGVQLSEELQLHPEQSTDAFVLHHPEAKYFNT
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgaaaactccggccaccgaccgagcgacttcgacacgaccttcatgtcgtcg
atgtcgcgacgcgtgctgatcggcgacggggcgatgggcacgatgctccaggccgcggac
ctcaccctcgatgacttcaaccagctcgagggttgtaacgagatcctcaacgacacccgc
cccgacgtcctcgaaggcatccatcgcgcctacttcgaggccggcgccgacgccgtggag
accaacaccttcggctgtaacctgtcgaacctcggtgactacgacatcgccgaccggatc
cgagagctggcctacaagggcaccgcgatcgctcgcggggtggccgacgagatgggtccg
tccgccgacggcatcgaccggtacgtgctcggttcgatgggcccgggaaccaagctgccc
agcctcgggcacacgacgttcgccgtgatccgcgacgcctacaccgaatgtgtcatcggc
atgctcgagggcggcgccgacgcggtgctcatcgagacctcgcaggacctgctgcaggtg
aaggccgcggtgatcgcggcacagcgcgccatggatcaggtgggtcgccgcatcccgatc
atcagccacgtcacggtcgagacgaccggcacgatgctgctgggttcggagatcggtgcc
gcgctggcagccatcgagccgctgggcgtcgacctcatcggcctgaactgcgccaccggt
ccggcggagatgagcgagcacctgcgctacctgtcgaagcatgcgcgcatcccggtgtcg
gtcatgcccaacgccggtctgcccgtgctcggcgcaaacggtgccgagtacccactgacg
ccggaggaactggccgagtcgatggcccagttcgtcggcgagttcggactgtccttcgtc
ggcggttgctgcggcaccacgccggagcacatccgccaggtcgccgaagcggtcgcgcag
gtcacccccgcgacgcgcgcgcctcagcacgagccggagacgtcgtctctctacaccgcc
gtgcccttcgatcaggacgcgagcttcctggtcatcggtgagcgcacgaacaccaacggc
tccaaggcattccgtgaggcgatgatcgccgaggactaccagaagtgcctcgacatcgcc
aaggaccagacgcgcgacggcgcgcacatgctcgacctcaacgtcgactacgtcggtcgt
gacggcgccgcggacatgaccgctctcgcgagccgcttcgcgacgtcgtcgacgctgccg
atcatgctcgactcgaccgagccggaggtcatccgcgcgggtctcgaggcgctcggcggt
cgttgcgcggtgaactcggtgaactacgaggacggcgacgggccggactcgcggttcaac
aagatcatgcgtctcgtcgtcgaacacggtgcggcggtcgtcgcgctgaccatcgacgag
gaggggcaggcgcgtaccgcggactggaaggtccgggtcgccgagcgtctgatcgacgac
atcaccggcaactggggtctcgccgaggaagacatcatcatcgatgccctgaccttcccg
atctcgacgggtcaggaggaggtccggcgcgacggcatcgaaaccatcgaggccattcgc
cggctgcacgagtcgcatcccgacgtgcacttcacgctgggtatctccaacatctcgttc
ggcctgaacccggccgcccggcaggtgctgaactcggtgttcctgcacgagtgcgtgcag
gccggcctcgacaccgcgatcgtgcacgcgtcgaagatcctgccgatggcacgtatcccg
gaggagcaccgtcaggtcgccctggatctggtctacgaccgccgacgcgagggttacgac
ccgctgcagaagctgatggagctgttcgagggtgtctcggccgcgtcggctcgcgagtcg
cgcgcccaggaactggcccagctgccgctgttcgagcggctggaacgacgcatcgtcgac
ggtgagcgcaacggtctcaccgacgatctcgacgaggcgatgacacaggtcccgccgctg
tcgatcatcaacgacacgctgctgtcggggatgaagaccgtcggcgagctgttcggctcg
ggtcagatgcagctgccgttcgtgctgcagtccgccgaggtcatgaaagccgctgtcgcc
cacctcgaaccacacatggaggcgaccggcgaggacggcaagggccggatcgtgctggcg
accgtcaagggcgacgtgcacgacatcggcaagaacctcgtcgacatcatcctgtccaac
aacggatacgaagtcgtcaacatcggcatcaagcagccgatcacgaccatcctcgacgtc
gccgcggacaagaaggccgacgtcatcggcatgtccggtctgctcgtgaagtcgaccgtc
gtcatgaaggagaacctcgaggagatcaacacgcgtggtctcgccgaggagtacccggtc
ctgctcggtggtgcggcgctgacgcgttcgtacgtcgagaacgacctgtcagaggtctac
gagggcgacgtgcactatgcgcgtgacgctttcgagggcctgcgtctgatggatgacatc
atggcccgcaagcgcggtggcggacccgacccggacagcgacgaggccaaggccgaggcg
gccaagaccgccgagcgcaaggctcggcacgagcggtccaagcgcatcgccgcgaagcgc
aaggccgccgaggagcccgtcgtggtgccggcgcgatcggatgtggccgccgacaacgag
atccccaccccgccgttctggggttcgcgcatcgtcaagggtgtgccgatcgccgactac
ctgcagctgctcgacgagcgcgcgctgttcctcggccagtggggtctgcgtggcgctcgc
ggcggcgacggtccgtcgtatgaggagctcgtcgagtccgagggccggccgcgtctgcgc
tactggatcgatcggctcgcgaccgagaacatcttgcagcacgccgcagtggtgtacggc
tactacccggcagtcagcgagggcgacaccgtccacgtgctcaccgagccggaccccgat
gcgccggtgcggttcagcttctcgttcccgcgccagcagcggtcgcggttcctgtgcatc
gccgacttcatccagtcgcgcgaggccgcgaaggccgccgggcgggtcgacgtcatgccg
ttccagctcgtcaccatgggtcagccgatcgccgacttcgcgaacaaactgttcgccgag
gacgcctaccgcgactacctggaggtgcacggcatcggtgtgcagttgaccgaggcgctc
gccgagtactggcatcagcgtgtgcgcagcgagctgaagttcggcgaccggtcgatggac
agcgaggatcccgaacacgcccaggggttcttcgacctcgaataccgcggtgcgcgtttc
tccttcggttacggcgcctgccccgatctcgaggaccgcgcgaagatgatcgagctgctc
gagccggagcggatcggtgtccagctctcggaggagctgcagctccatccggagcagtcc
acggatgcgttcgtgctgcaccacccggaagccaagtacttcaacacctga
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