Gordonia rubripertincta: GCWB2_15245
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Entry
GCWB2_15245 CDS
T05629
Symbol
gdh
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00220
Arginine biosynthesis
gru00250
Alanine, aspartate and glutamate metabolism
gru00430
Taurine and hypotaurine metabolism
gru00910
Nitrogen metabolism
gru01100
Metabolic pathways
gru01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
GCWB2_15245 (gdh)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
GCWB2_15245 (gdh)
00220 Arginine biosynthesis
GCWB2_15245 (gdh)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
GCWB2_15245 (gdh)
Enzymes [BR:
gru01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
GCWB2_15245 (gdh)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_HM3
GDH_ACT3
GDH_ACT2
GDH_HM1
GDH_ACT1
Motif
Other DBs
NCBI-ProteinID:
ASR03838
LinkDB
All DBs
Position
complement(3329493..3334259)
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AA seq
1588 aa
AA seq
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MTSIGDVTSLVPDAVNHYFKSRAEGSGADGAAEQVVRHLDVATRRDPGQALVDVAVDEGG
AVEIVVVNDDMPMLVEAVLATVEAHDLSIDRMDHPVMPVQRDTDGRLEAIDDGPGAVWES
WIFVGGLAGHPGVDPDVLRSDLLEVVFRVGDVDHDAARMRSRMTSCAADLSVAPVRESTG
IRNTDRYEYAKLLEWFAGNHFHPLGYTRVGTDGAGDGDERLGVWRTDSINRDFPSVTTRP
LLPRASRIFVATGIQRSNFPVLLQVPAFDSHGNYDGEHRFLGTLTSSGLHQTVLDVPVLR
TKVHDVLARAGVDEDSFAGQSMIELLQNYPVVEMFASTTDELARRVTEMLDAVATRSLRL
FVRTNVDGKTAVALIYLPRDRYNTQSRLALERALMDELHGSALEYTARVSEMPLALLQVL
VCIEPGAASELGSVDTGSPAHARMQAALAAAIRGWDERVRELAATLGDRFGSSSGGPELL
LRQLPSLSDDYKEIREPQDALEDLIHVVSLEPGALAVTLDATEDRGPGDRHRWRFTLYLC
GESATLTDVLPVLHSLGLDVLEEHPYEIRRSDDTVCWAYEFIVQLAAGMSVDLDHADDLE
ERFTEAFRRIWLAAAEVDDYNELIIRCGLDWRSAAMLRAYGQYLRQCGFSYSTAHVANVL
GRHPQITRGLVDLFVASFDPVAADLDRRERVSEQLRADIGTVLSLDADRIVSAFAAVMTA
TSRTNYFVTDTTGEGDREHRPVISFKLRPREIPQTPEPRPLHEIFVYSPRVEGVHLRFGA
VARGGLRWSDRKEDFRTEILGLVKAQAVKNAVIVPLGAKGGFVVKRPPAPTGDAATDRDA
QRAEGIACYRQFISGLLDITDNIDRSTGEVIPARGVVRLDEDDTYLVVAADKGTAAFSDI
ANEVSQSYGFWLGDAFASGGSAGYDHKAMGITARGAWESVKRHFREMGVDTQTQDFTVVG
IGDMSGDVFGNGMLLSGHIRLVAAFDHRHIFVDPEPVADRSHRERRRLFELPRSSWADYD
TDLIGVGGGVWSRDRKSIPVSAAMAAALGIEEGVDELSPPELIRAILLAPVDLLWNGGIG
TYIKASTETHGDVGDKSNDAIRVDGDQVRAKVIGEGGNLGVTERGRIEFDLAGGRINTDA
LDNSAGVDCSDHEVNIKILLDSAVSGGALDPGDRNPLLESMTDDVADLVLADNISQNSEL
GFCRTFELTRVEVHARMLDQLSRERGVDLRLEALPQARELRKRFEGELHRGLTSPEFATL
MAHVKLEAKSDLLASDLPDNDVFAPRVARYFPQALRETYGEQINSHRLRRQIVTTTLVND
VIDHAGMTHLFRLSEGAGCTTEEGVRAYVVSNRIFGMGEVFESIRHAPAPAEVVDGMMLY
ARRLLFRASRWLLAFRPQPLALAAEITRYSDRITRLSASVDGWLGESSAKDIADRVRVYV
DEGVPDDLARTVAVSLHRFCLLDIIDAAEISDRDPEEVGDLYFAVMEHFGLEELLTAVSN
LDYGDRWHALARLAVRDDMHGALRALTLKILEVSEPDESSDEKIAEWESSQSNRLSRLRT
VLDEIEETGTLDLATLSVAARQLRSVIR
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
gtgactagcatcggcgatgtgacctcactcgtgccggacgcggtgaaccactacttcaag
tcccgggccgaaggctccggggcggacggcgccgccgagcaggtggtgcgtcaccttgac
gtcgcgacccggcgcgatcccggccaggcactggtcgacgtcgccgtcgacgagggcggc
gcggtcgagatcgtcgtcgtcaacgacgacatgccgatgctcgtggaggcggtgctggcg
accgtcgaggcacacgacctctccatcgaccgcatggaccatccggtcatgccggtgcaa
cgcgacaccgacggccggctcgaggcgatcgatgacgggcccggcgccgtctgggagtcc
tggatcttcgtcggcgggctcgccggacatcccggcgtcgacccggatgtgctccgatcg
gacctcctcgaggtcgtgttccgggtgggcgacgtcgaccacgacgccgcccggatgcgg
tcgcggatgacatcctgtgccgccgacctgtcggtggcaccggtgcgcgagtccaccggc
atccgcaacaccgaccgctacgagtacgccaaactcctcgaatggttcgccgggaaccat
ttccaccccctcggctacacccgggtgggcaccgacggcgccggggacggcgacgagcgg
ctcggtgtctggcgcaccgactccatcaaccgggacttcccgtcggtgaccacgcggcca
ctgctcccacgagcgagtcggatcttcgtcgccactggcatccaacggtcgaatttccct
gtgctgctgcaggtcccggccttcgattcgcacggcaactacgacggtgagcaccggttc
ctcggcacgctgacctcctccggtctgcaccagaccgtgctcgacgtcccggtcctgcgt
accaaggtgcacgatgtgctcgcgcgggccggtgtcgacgaggactccttcgctgggcag
tccatgatcgagctgttgcagaactatccggtggtggagatgttcgcctccaccaccgac
gagctcgcccgtcgcgtcaccgagatgctcgacgcggtcgcgacccgctcgctgcggctg
ttcgtgcgtaccaacgtcgacggcaaaaccgcggtcgccctcatctacctaccgcgggat
cgctacaacacccagagtcgactcgccctcgaacgtgccctcatggacgaattgcacggc
agcgcactcgaatacacggctcgtgtgagcgagatgccgctcgccctcctccaggtgctg
gtctgtatcgaaccgggcgccgcatccgaactgggatcggtggacaccgggtcgcccgcg
catgcccggatgcaggcggctctcgcggcggcgatccgtggctgggacgaacgtgtccgg
gaactcgccgcgaccctcggcgaccggttcgggtcgtcttcgggcggtccggagctcctt
ctgcgacaactaccctcgctctccgacgactacaaggagatccgcgaaccccaggacgcc
ctcgaggacctgatccacgtcgtctccctcgaaccgggcgcgctcgcggtgacactcgac
gccaccgaggaccgcgggccgggcgaccgccaccgctggcggttcaccctctacctgtgc
ggggaatcggcgaccctcaccgacgtcctaccggtgctgcacagtctcggcctcgacgtt
ctcgaagagcatccgtacgagatccggcggtccgacgacaccgtctgctgggcctacgag
ttcatcgtgcaactggccgccgggatgtcggtggacctcgaccatgccgacgacctcgag
gagcgcttcaccgaggcgttccgtcggatctggctcgctgcagcagaagtcgacgactac
aacgagctgatcatccgctgcggcctggactggcgatcggcggccatgctgcgtgcctac
gggcagtacctgaggcagtgcggattctcctacagcacagcccatgtcgcgaatgtgctc
ggtcgtcatccgcagatcacacgcgggctggtcgatctgttcgtggcgtctttcgacccg
gtcgccgccgacctcgaccggcgcgagcgggtgagcgaacaactccgggccgacatcggc
acggtgctgagcctcgacgccgatcgcatcgtgtcggccttcgcggccgtcatgaccgcg
acgtcacggaccaactacttcgtgacggacacaaccggtgaaggggatcgcgagcatcgc
ccggtgatctcgttcaagctccggccccgcgagatcccgcagacccccgaaccccgtccg
ctccacgagatcttcgtgtactcgcctcgggtcgagggcgtccacctgcggttcggtgcg
gtggcgcgcggtgggctgcgctggtcggatcgcaaggaggatttccgtaccgagatcctc
ggcctggtgaaggctcaggccgtcaagaacgccgtcatcgtccccctcggcgcgaagggc
gggttcgtcgtcaaacgcccgccggcgccgaccggggacgccgccaccgaccgggatgcg
cagcgcgcggaggggatcgcctgttaccgacagttcatctccggtctgctcgacatcacc
gacaacatcgatcgctcgaccggcgaggtcatcccggcacgcggggtggtccggctcgac
gaggacgacacctacctggtggtcgcggccgacaagggcaccgcggcgttctccgacatc
gccaacgaggtgtcacagtcatacggcttctggctcggtgacgcgttcgcctcgggtggc
tcggccggttacgaccacaaggccatgggcatcaccgcgcgcggtgcctgggaatcggtc
aaacggcatttccgggagatgggcgtcgacacccagacgcaggacttcacggtcgtcgga
atcggcgacatgagcggggacgtgttcggcaacggcatgctgctcagcgggcacatccgg
ctcgtcgccgccttcgatcaccggcacatcttcgtcgacccggaacccgtcgcggaccgg
tcccaccgcgaacgccgccgcctgttcgagctgccacgatcgtcgtgggccgactacgac
accgatctgatcggcgtgggcggcggggtgtggtcccgcgaccgcaagtcgatccccgtc
agtgcggcgatggcggccgcgctcggtatcgaggagggcgtcgacgaactctcgccgccc
gaactgatccgggcgatcctcctcgcgccggtcgacctgctctggaacggcgggatcggc
acgtacatcaaggcgtcgacggagacccacggggacgtcggcgacaagtcgaacgacgcg
atccgcgtcgacggtgatcaggtgcgggccaaggtgatcggagagggcggcaacctcggg
gtcaccgagcgcggccggatcgagttcgatctcgcgggcggccggatcaacaccgacgcg
ctcgacaactcggcaggcgtcgactgctcggaccacgaggtcaacatcaagatcctgctc
gactcggcggtgtcgggcggtgcgctcgatcccggcgaccggaacccgctgctcgaatcg
atgaccgacgacgtcgccgacctcgttctcgccgacaacatctcgcagaactcggagttg
gggttctgccgcaccttcgagctgacccgcgtcgaggtgcacgcacggatgctcgaccag
ctctcccgcgaacgcggcgtcgaccttcggctcgaagccctcccgcaagcgcgggagctc
cgcaagcggttcgagggggagctacaccgcggactcacctcacccgagttcgcaaccctg
atggcgcacgtcaaactcgaggcgaagtcggacctgctggccagcgacctccccgacaac
gacgttttcgccccacgcgtcgcccgctacttcccgcaagccctgcgcgagacgtacggc
gagcagatcaactcccaccggctgcgacggcagatcgtcacgacgaccctcgtcaacgac
gtcatcgatcacgccgggatgacgcacctgttccggttgagcgagggcgcggggtgcaca
accgaagaaggtgtccgcgcctacgtcgtgtccaacaggatcttcggcatgggcgaggtc
ttcgagagcatccggcacgcaccggcaccggccgaggtcgtcgacgggatgatgctctat
gcccgccggctgctgttccgggcgtcgcggtggctgctcgcgttccgtccgcagccgctc
gccctggccgccgagatcacccgctactccgatcgaatcacccggttgtccgcgtccgtc
gacgggtggctgggggagagctccgcgaaggacatcgccgaccgggtgcgcgtgtatgtc
gacgagggggtccccgacgacctcgcccggacggtggccgtcagcctgcaccggttctgc
ctgctcgacatcatcgacgccgcggagatctccgaccgcgatcccgaagaggtcggcgac
ctctacttcgcggtgatggaacacttcggactcgaggaactgctcaccgcggtgtcgaac
ctggactacggcgaccgctggcacgcgctcgcccggctggcggttcgcgacgacatgcac
ggcgcgctccgggcgctcaccctcaagatcctcgaggtcagcgaacccgacgagtcgagc
gacgagaagatcgccgaatgggaatcctcccagtcgaaccggctcagtcgcctgcgcacc
gttctcgatgagatcgaggagaccgggaccctcgacctcgcgacactgtcggtcgccgcg
cggcaactccggagtgtgattcgctga
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