Gryllotalpicola protaetiae: D7I44_00225
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Entry
D7I44_00225 CDS
T05660
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
gry
Gryllotalpicola protaetiae
Pathway
gry03030
DNA replication
gry03410
Base excision repair
gry03420
Nucleotide excision repair
gry03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D7I44_00225 (ligA)
03410 Base excision repair
D7I44_00225 (ligA)
03420 Nucleotide excision repair
D7I44_00225 (ligA)
03430 Mismatch repair
D7I44_00225 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gry03032
]
D7I44_00225 (ligA)
03400 DNA repair and recombination proteins [BR:
gry03400
]
D7I44_00225 (ligA)
Enzymes [BR:
gry01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
D7I44_00225 (ligA)
DNA replication proteins [BR:
gry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D7I44_00225 (ligA)
DNA repair and recombination proteins [BR:
gry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
D7I44_00225 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D7I44_00225 (ligA)
MMR (mismatch excision repair)
DNA ligase
D7I44_00225 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D7I44_00225 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
HHH
Nlig-Ia
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AYG02112
UniProt:
A0A387BIR6
LinkDB
All DBs
Position
complement(32490..34853)
Genome browser
AA seq
787 aa
AA seq
DB search
MSVAEVTQQQAAAEVAELTDRINGARESYYGEDASLVDDATYDGWMHRLEELERLFPELA
SQDSPTQTVGAAEETGLDTIEHAERMLSLDNVFSIDELSEWCAKAEELAGRKVEWLTELK
IDGLAINLRYENGVLTSAATRGDGRIGEIVTGNALKLADIPERLAGTGHPALVEVRGEVF
IPVAAFEKLNELQAELRERYIAELQERHEARRSGQPFDAEKAKTSAGRRFPAFANPRNAA
SGGLRQQLDKKKTALEREASIARLESLRLFVHGIGAWPDPPVSAQSEVYDLLKSWGLPTS
PYYEVFPSVDGVVGFVEKYGAERHSVLHELDGIVVKVDELALHDEMGATSRAPRWAIAFK
YPPEEVQTKLLDIVVSVGRTGRATPFAVMEPAHVAGSVVRQATLHNQDVVKAKGVLIGDT
VVLRKAGDVIPEVLGPVIEKRDGTEREFVMPERCPECGTPLAPAREGDIDLRCPNARSCP
AQVRGRVEHVGSRGALDIEGLGEVGAAALTEATAGRPALLATEAGLFDVTVADLFPIRAL
VRDVETGEPRLLDDGSYDYRTPFQRRRKKTGKDSDGLFDPAADGFAGDEEAVPSKAAEEL
IAELEKAKTKDLWRMLVALNIRNVGPVAARALAGYFGSLEAIRAASVEQLAEVAGVGPII
AGSLTEWFEVDWHREIVERWAAAGVRFAIPGHPGPGAAEETGGVLSGLTVVATGSLEGFS
REGANEAIIAAGGKAASSVSKKTDYVAAGPGAGSKLAKAEELGIPILDAAQFAILVTQGP
DGLNLTS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtggcagaagtgacgcagcagcaggccgcggccgaggtcgccgagctgaccgac
cgcatcaacggggcgcgcgagtcgtactacggcgaagacgcgtcactcgtcgacgacgcc
acctatgacgggtggatgcaccggttggaggagctcgagcggctgttccccgagctcgcc
agccaggactcgccgacgcagacggtcggggctgcggaagagacggggctcgacacgatc
gagcacgccgagcgcatgctcagcctcgacaacgtgttctcgatcgacgagctgagcgag
tggtgcgcgaaagccgaggagctcgcggggcggaaggtcgagtggctcaccgagctcaag
atcgacgggctcgcgatcaacctgcgctacgagaacggcgtgctgacgtcggccgcgacg
cgcggcgacgggcgcatcggcgagatcgtgaccggcaacgcgctgaagcttgccgacatc
cccgagcggctggccggaacggggcatcccgcgctcgtcgaggtgcggggcgaggtgttc
atccccgtcgccgcgttcgagaagctcaacgagctgcaggccgagctgcgcgagcgctac
atcgccgagctgcaggagcggcatgaggcgcggcgctcagggcagcccttcgacgccgag
aaggcgaagacgtcagcagggcggcggttcccggccttcgcgaacccgcgcaacgcggcg
agcggcgggctgcgccagcagctggacaagaagaagacggcgctcgagcgcgaggcatcc
atcgcccgtctcgaatcgctgcgcctgtttgtgcacggcatcggcgcgtggccggacccg
cccgtctccgcccagagcgaggtctacgacctgctgaagtcgtgggggctgccgaccagc
ccgtactacgaggtgttcccgtccgtcgatggcgtcgtcggcttcgtcgagaagtacggc
gccgagcggcactcggtgctccacgagctcgacggcatcgtcgtgaaggtcgacgagctg
gccttgcatgacgagatgggcgcgacgagtcgcgcgccgcgctgggccatcgcgttcaag
tacccgcccgaggaagtgcagacgaagctgctcgacatcgtcgtgtccgtcggccgcacc
gggcgagcgacgccgttcgccgtcatggagcctgcgcacgtcgccggctcggtcgtgcgg
caggcgacgctgcacaaccaagacgtcgtcaaggccaagggcgtgctgatcggcgacacg
gtcgtgctgcgcaaggcgggcgacgtgatccccgaggtgctcgggcctgtcatcgagaag
cgcgacggcaccgagcgcgagttcgtgatgcccgagcgctgccctgagtgcggcaccccg
ctcgcgccagcccgtgaaggcgacatcgacctgcgctgcccgaacgcccgctcctgccct
gcgcaggtgcggggcagggtcgagcatgtcggctcgcggggcgcgctcgacatcgaagga
ctgggtgaggtcggggctgctgcactcaccgaggcgacggcggggcgccctgctctgctc
gcgaccgaggccgggctgttcgacgtgaccgtcgccgacctgttcccgatccgtgcgctg
gtgcgcgacgtcgagaccggcgagccgcggctgctcgacgacggcagctacgactaccgc
acgccgttccagcggcgacggaagaagaccgggaaagactccgacgggctgttcgacccg
gcggccgacggcttcgccggcgacgaggaagcggtgccgtcgaaggccgcggaggagctg
atcgccgagctcgagaaggcgaagacgaaggacctgtggcggatgctggtggcgctcaac
atccgcaacgtcggccctgtcgcggcgcgggctctcgcggggtacttcgggtcgctcgag
gcgatccgtgcggcatccgtcgagcagctcgcggaggtcgcaggtgtcgggccgatcatc
gccgggtcactgaccgaatggttcgaggtcgactggcatcgcgagatcgtcgagcgctgg
gctgcggccggtgtgcggttcgcgattccgggccaccccggcccgggcgccgctgaggag
accgggggagtcctgtcgggactcaccgtcgtcgccaccggctcactcgagggcttctca
cgcgagggggcgaacgaggcgatcatcgccgcgggcggaaaggccgcctcgagcgtgtcg
aagaagaccgactacgtcgcggccggccccggtgcgggctcgaagctcgcgaaggccgaa
gagctgggcatcccgattctggatgccgcgcagttcgcgatcctcgtgacgcaggggcct
gacgggctgaatctcacttcatga
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