Gemella sanguinis: FOC50_08180
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Entry
FOC50_08180 CDS
T06314
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gsa
Gemella sanguinis
Pathway
gsa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOC50_08180 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsa03400
]
FOC50_08180 (nth)
Enzymes [BR:
gsa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FOC50_08180 (nth)
DNA repair and recombination proteins [BR:
gsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FOC50_08180 (nth)
Prokaryotic type
FOC50_08180 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
LAMB1
DUF2400
Pox_F16
Motif
Other DBs
NCBI-ProteinID:
QGS08242
UniProt:
A0ABX6FPN4
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All DBs
Position
1717737..1718381
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AA seq
214 aa
AA seq
DB search
MTGLVDKDLQNKVKLITQYLDKNFPNVDCELNFSNNLELIIAVLLSAQCKDEYVNRATKK
LFEKYKTIDDYADAKVEDIEKLIKTLGLYKAKSKNIVGMANMLRDVYDYKIPTTREELIK
LPGVGRKTANVVLSVGFNIPAIAVDTHVERVAKMFGLADKNDNPLQVEKKLMELFPMKDW
GKIHHQLIHLGRYKLPARGEKNLDAELEKLLINN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgactggtttggtagataaagatttacaaaataaagttaaattaattacacaatatctt
gataaaaacttccctaatgtagattgtgaacttaatttttcaaataatctagaattaatt
attgcggttttattatcagcccaatgtaaagatgagtatgttaatagagctacaaaaaaa
ttatttgaaaaatataaaactattgatgattatgctgatgcaaaagttgaagatattgaa
aaattaataaaaacattagggttatataaggcaaaatcaaagaatattgttggtatggca
aatatgttaagagatgtgtatgattataaaatacctactactcgtgaggaacttataaag
ctacctggggtagggaggaagacggcaaacgttgtattatcagttggttttaatataccg
gcaatagcagtagatactcatgtagaaagagtagctaaaatgtttggtttggcagataaa
aatgataatccgcttcaggttgagaaaaaattaatggaattatttccaatgaaagactgg
ggaaaaatacatcatcaattaattcatttaggacgttacaaacttcctgcaaggggagaa
aaaaatttagatgctgaattagaaaaactattgataaataattag
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