Geoalkalibacter subterraneus: GSUB_09860
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Entry
GSUB_09860 CDS
T03585
Name
(GenBank) RND transporter
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb01501
beta-Lactam resistance
gsb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GSUB_09860
01503 Cationic antimicrobial peptide (CAMP) resistance
GSUB_09860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsb03036
]
GSUB_09860
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsb02000
]
GSUB_09860
01504 Antimicrobial resistance genes [BR:
gsb01504
]
GSUB_09860
Chromosome and associated proteins [BR:
gsb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GSUB_09860
Transporters [BR:
gsb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GSUB_09860
Antimicrobial resistance genes [BR:
gsb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GSUB_09860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
T7SS_signal
HEPN
YlqD
Biotin_lipoyl
PaREP1
TPR_MLP1_2
OEP
ANAPC5
Motif
Other DBs
NCBI-ProteinID:
AJF06790
UniProt:
A0A0B5FRL8
LinkDB
All DBs
Position
complement(2138481..2139698)
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AA seq
405 aa
AA seq
DB search
MRRRGVYISIAIAAAVIAFLAVQVSRKQWQKDEDPNAAGKALPVTIASVVPHEFADEISA
VGTFKARDTSPLSPKVAGTVSRVLVDIGERVNAGEVVIKLDRTNYDLGVKQARAALAAAE
AAVPQAEAHFEQAEKEYRRAIELLKEKVIPQSRFDASEAAFKSAKEAVFYARAQRDQAKA
ALETALEHLKDADIRSPIGGAVVERNVEIGQAVAPGGRLLLIVDQTSLNLDVDLPEADIG
RIVVGTVALITTDAFPGHEYSGKVTVINPLVDRKTRTFRMRIEVPNPSGKLVDGMYARVK
LSAEKRRSLAVPRETLQRLPGSGTYYVFVVEGNKAHKRTVEIRAMDDQFAEVMGGLVEND
KVVTSGAGRLQSGMEVSVQDILNKNGTDNSGGQLFKKNGGEHVGR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaagaggagtctatatatccattgctattgcggctgctgttattgcgttcttg
gctgtccaagtttccaggaagcaatggcaaaaagatgaagatccgaacgcggcgggcaag
gcgttgcctgtcacaatcgcatctgttgtcccgcacgaattcgctgatgaaatcagcgcc
gtcggcacctttaaagcccgagacacgagtccgctaagccccaaggtggcaggaacggtg
agccgggttctggttgatatcggtgagcgcgtcaatgccggtgaggtcgttataaaactg
gacagaacaaactatgatctcggcgtcaagcaggcccgggcggcgctagcagctgcggaa
gcagcagttccgcaggctgaagcccattttgaacaggccgagaaagaataccgacgcgca
atcgaactgctgaaggaaaaagtgattccgcaaagtcgctttgatgcatcagaagcggcc
tttaaaagcgccaaggaagcggtgttctacgcccgagcacagagggaccaggcaaaggcc
gccttggagacagcgctggaacatctcaaggatgcagatatccgatcgcctatcggcggc
gctgtcgtggagagaaatgtggaaatcggtcaggcggtcgctcccggcggccgacttctg
ctaatcgtggaccaaacatctctgaacctggatgtcgatttgccggaagcagacattggc
cggattgtcgttggaactgttgcgctgatcacgacagacgccttcccgggacatgagtat
tcagggaaagtaaccgttatcaatccattggtggaccgaaagacgcgtactttccgcatg
agaatcgaggtgccgaatccgtccgggaagttggtggacggaatgtatgccagggtgaag
ctttcggcagagaaaagaaggtcccttgccgttccccgtgaaaccttgcaacgcctcccc
ggcagcggcacctattacgtttttgtggtggaaggaaataaggcccataagcgaacggtc
gaaattagggccatggatgaccaatttgccgaagtgatgggcggcttggttgagaatgac
aaagtggtcaccagcggagcgggacgtttacagtcaggcatggaggtaagcgtgcaagat
attttgaacaagaatgggacggataactctgggggacaacttttcaagaagaacggcggt
gaacatgtcggacgatag
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