Geoalkalibacter subterraneus: GSUB_13015
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Entry
GSUB_13015 CDS
T03585
Name
(GenBank) hypothetical protein
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb00300
Lysine biosynthesis
gsb00550
Peptidoglycan biosynthesis
gsb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GSUB_13015
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GSUB_13015
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gsb01011
]
GSUB_13015
Enzymes [BR:
gsb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GSUB_13015
Peptidoglycan biosynthesis and degradation proteins [BR:
gsb01011
]
Precursor biosynthesis
Amino acid ligase
GSUB_13015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
cwf21
Motif
Other DBs
NCBI-ProteinID:
AJF08041
UniProt:
A0A0B5FWR2
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All DBs
Position
complement(2785278..2786795)
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AA seq
505 aa
AA seq
DB search
MTVRKKISSILPNTAKAMTGGTPDPEVTGLCCDSRRVEAGHAFFALPGVQSDGRRFIADA
LQRGAQAVVAEHPVDLPEGIAGFVVSNGREAMAHAAALFYDDPTAGLPVVGVTGTNGKTT
VTYLLESILKAAGFRPAVLGTINYRLGDTCLPAPHTTPESTDLIKTLAQFRQEGADSLVM
EVSSHALAQHRADGVHFTVGVFTNLTSEHLDYHGDMASYFASKKRLFHLLPEAEGHAVVN
IDDPYGRQLAEEIEGTLTCGRREGAAVTPESVTLTLDGINGRIRTPAGTFELQSGLLGEF
NLENLLCAVAAGIALDLPIEIIEKGIRQAPGVPGRLERIENSKGAVILVDYAHTGDALEK
VLSTVCRLNPRRLLVVFGCGGDRDKSKRPAMAAVAIRHADLAIITTDNPRSEDPATIISE
IETGCREAGGRSLSREELSGLDKGYFIEHDRRRAIDLAVSLLQPGDLLLVAGKGHEDYQI
IGSERLHFDDREQVRRSLAEQEVSG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcgtaagaaaatatccagcatactgccgaacacggcaaaagcgatgacgggg
ggcactcccgatcccgaggtcaccgggctgtgctgtgattcgcgccgggtcgaagcggga
catgcgttttttgcgctgcccggcgttcaatccgacggtcgccgcttcattgccgatgct
ctgcagcgtggcgcccaggccgtggtcgcagagcacccggtcgatctgcccgaggggatt
gcagggttcgtggtgtcgaacgggcgtgaggccatggcgcatgctgccgctcttttttac
gatgacccgacggcggggctgccggttgttggtgtgaccggaaccaacggcaagaccacc
gtgacctatcttcttgaatcgatcctcaaggctgcgggcttcagacctgccgtgctggga
accatcaactaccgcctgggggacacctgccttccggccccccatacgacaccggaatcg
accgacctcataaaaacgctggcccagtttcgccaggagggcgcagacagcctggtcatg
gaggtttcttcccacgccctggcgcagcaccgcgccgatggtgttcattttacggtcgga
gtgttcactaatctgacctccgagcacctcgattatcatggtgatatggcatcttatttt
gccagcaagaagcgcctgtttcatctgctgccggaggccgaagggcatgcggtcgtcaat
attgacgatccttacgggcggcagctggcggaggagatcgagggtaccctgacctgcgga
cgcagggagggcgctgcggtgactcccgaatcggtgacattgactctcgatggaatcaat
ggccggatccgcacacccgccgggacctttgaactgcaatccggactgctgggtgagttt
aacctggaaaatcttctgtgtgcggtggccgcgggtattgcgctggatctgcccatcgaa
attatcgaaaaagggatacggcaggcgcccggagtgccgggacgtctggagcggattgaa
aacagcaaaggggctgtcatccttgtggactatgcccacaccggcgacgcgctcgaaaag
gttttatccacagtctgtcggctcaacccccggcggttgctggtggtgttcggctgcggt
ggggatcgggacaaaagcaagcgtcctgccatggcggcggttgcgatacgccatgccgat
cttgccattatcacgacggataacccgcgcagcgaagacccggcgacgatcatcagcgag
atcgagacggggtgtcgcgaagcgggcggccgctctttgtcgcgcgaggaattgagcgga
ctggacaagggatattttatcgagcacgatcggcgtcgggcaatcgacctggccgtttcg
ctgctgcagcccggcgacctgctgctggtggccggcaaggggcacgaggattatcagatc
atcggctctgagcgtctgcattttgatgatcgggaacaggttcgccgaagtctggcagag
caggaggtctcaggatga
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