Geoalkalibacter subterraneus: GSUB_13045 Help Entry GSUB_13045        CDS       T03585                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism gsb  Geoalkalibacter subterraneus Pathway gsb03030   DNA replication gsb03410   Base excision repair gsb03420   Nucleotide excision repair gsb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:gsb00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     GSUB_13045    03410 Base excision repair     GSUB_13045    03420 Nucleotide excision repair     GSUB_13045    03430 Mismatch repair     GSUB_13045  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:gsb03032]     GSUB_13045    03400 DNA repair and recombination proteins [BR:gsb03400]     GSUB_13045 Enzymes [BR:gsb01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      GSUB_13045 DNA replication proteins [BR:gsb03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      GSUB_13045 DNA repair and recombination proteins [BR:gsb03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      GSUB_13045    NER (nucleotide excision repair)     GGR (global genome repair) factors      GSUB_13045    MMR (mismatch excision repair)     DNA ligase      GSUB_13045   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       GSUB_13045 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH Rad9_Rad53_bind Zn_ribbon_NUD RUBY_RBDX Motif Other DBs NCBI-ProteinID:  AJF07299 UniProt:  A0A0B5FRM6 LinkDB All DBs Position 2792341..2794356 Genome browser AA seq 671 aa AA seqDB search MDHKQAHERHQDLCRRISHHNYLYHVLDEPEISDAEYDRLFRELLDIEREFPDLVTPDSP SQRVGAPPLGKFETIDHSLPMLSLENALNEGEWRDFDNRVKRGLETEDEVEYVCETKLDG VAVELVYRDRLLSLGSTRGDGMTGELITENLKTLPSIPLRLREGAPSTLEVRGEVYMDLD AFQTLNREREEQGEPPFANPRNATAGSLRQLDSKITAKRPLKIFCYGIGVMEGPAPATHA DLLQHLQQWGLRVNLEQTRVVTGADGVWQEFERLLAQRDELPYEIDGMVVKVNRREWQDE LGDTSRAPRWAIAIKFPPRQAETRIEEIILQVGRTGAITPVARLEPVEVSGVTVSRASLH NWDEMERLDVRVGDHVIVERAGDVIPYVVRVLTEKRNGSESVLPAPRNCPVCGSPAARIE GEVVYRCQNLSCPAKLKETIKHFASRGAMDIEGLGDRTIEQMVERKVITNFSDLYRIGKE DLFRLDRMGEKLAENLLKAIEDSKKPELARFIYALGLRHVGEHTARILARNFGTLEALTQ ADHEQLTQIHEIGPQVADSVVSFFRDPHNRQTLTALQQAGVEPTREERQADQSLAGKTFV FTGALTRFTRQEAQQKVEQLGGRAAGSVSKKTTAVIAGENAGGKLDKARSLGVPIWSEEQ FLEMLKEENSK NT seq 2016 nt NT seq  +upstreamnt  +downstreamnt atggaccacaaacaggcacacgagcggcaccaggacctctgccgccggatttcccaccac aattatctctatcatgtgctggatgagccagaaatcagcgatgcggaatatgatcgcctt ttccgggagctgctggatatagaacgtgagttccctgaccttgtcacgccggactccccg tcacagcgagtcggcgccccgccgctcggaaaattcgaaaccatcgaccattccctgccc atgctctcccttgaaaacgcgctgaacgaaggggaatggcgtgattttgacaatcgcgtg aagcgcggccttgagaccgaagacgaggtggaatacgtctgcgagaccaaacttgacggg gtggcggtcgaactggtgtatcgcgatcggctgctgagcctggggagcacgcgcggtgac ggcatgaccggcgaactgatcaccgaaaatctcaaaactctgccctccatccccttgcgg ctgcgcgaaggcgccccctccaccctcgaagtgcggggggaagtctatatggacctcgac gcctttcaaaccttgaaccgcgaacgagaggaacagggagagccgccttttgccaatccc cgcaatgccaccgcgggcagcctgcgccaacttgattcgaaaattactgcaaagcgcccg ctcaagatattctgttacggcatcggggtaatggagggccctgcccccgccacccatgcc gacctgctgcaacaccttcagcagtgggggttgagagtcaaccttgagcagacccgcgtt gtcaccggcgccgatggcgtctggcaggaatttgaacgactcctcgcacagcgcgatgaa ctgccctatgaaatcgacggcatggtggtcaaggtcaaccggcgggaatggcaggatgag ctgggtgacacctcgcgcgcgccgcgctgggccatcgccatcaaattcccgccgcgccag gctgaaacccgcatcgaggagatcattctgcaggtcggacgcaccggcgccatcactccg gtggcccgcctggagccggtcgaagtaagcggcgtgaccgtttcccgggccagcctgcac aattgggacgagatggagcgcctggatgtccgggttggcgaccatgtcatcgtcgagcgc gccggggatgtgatcccctacgtggtgcgggttctgaccgaaaaacgcaacggcagcgaa agcgtcctgcccgcaccgcgaaactgccctgtctgcgggtcgccggccgcccgcatcgaa ggcgaggtggtttacagatgtcagaacctgagctgcccggcaaaactcaaggaaacaatc aagcacttcgcctcacgcggcgccatggatatcgaagggttgggagaccgcaccatcgaa cagatggttgagcgaaaggtgatcacaaacttcagcgatctttaccgcatcggcaaagag gacctgttccggctcgaccgcatgggggaaaaactggcggagaatctgctcaaagccata gaggacagcaaaaagcccgaacttgcacgctttatttatgccctgggattgcgtcacgtc ggcgagcataccgcccggattctggcgcgcaacttcggcaccctcgaggccctgacacag gccgatcatgagcaattgacgcagatccatgagatcggaccgcaggttgccgacagcgtg gtcagcttctttcgcgatcctcacaatcgccagaccctgaccgctctgcagcaggccggc gtcgaaccgactcgcgaagagcggcaggcggatcaatcgctggcaggaaaaacctttgtc tttaccggcgccctgacccgcttcacccgccaggaagcccagcagaaggtggagcagctc ggtggacgcgcggccggatcggtcagcaaaaaaaccacagcggtcatcgccggcgagaat gccggcggcaaactggacaaagcccgcagcctgggcgtgccgatctggagcgaggagcag tttctggagatgctgaaagaggagaactcgaaatga

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