Geotrypetes seraphini (Gaboon caecilian): 117345480
Help
Entry
117345480 CDS
T09159
Symbol
ITCH
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy homolog isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04120
Ubiquitin mediated proteolysis
gsh04144
Endocytosis
gsh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117345480 (ITCH)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117345480 (ITCH)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117345480 (ITCH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117345480 (ITCH)
04121 Ubiquitin system [BR:
gsh04121
]
117345480 (ITCH)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117345480 (ITCH)
Membrane trafficking [BR:
gsh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117345480 (ITCH)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
HECT type E3
117345480 (ITCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117345480
NCBI-ProteinID:
XP_033770071
UniProt:
A0A6P8NLP5
LinkDB
All DBs
Position
11:complement(137291350..137383406)
Genome browser
AA seq
854 aa
AA seq
DB search
MKSQLQITIISAKLKENKKNWFGPSPYVEVSVDGQSKKTEKCNNTHSPKWKQHLTVIVTP
ISKLNFRVWSHQTLKSDVLLGSATLNIYETLKTNNMKLEEVVMSLQLQGDREQGEAVGDL
SVCLDGMQVDPELLTNGDATCINNTTQTNGSRTQNDALSLSTSIATSDICEDSGTSESRV
INGNSPALSNGGLKPVIPPRPSRPPPPTPYRLSISAGGSSAPSGTDGSSTTSVLSTSTNA
PLQRSPEEGATGILTTPPISRQIMPVNPAGSRVAAAPQGPLPPGWEQRVDQHGRAYYVDH
VEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHITRTTTWQRPTLESVRNYEQWQLQRNQL
QGAMQQFNQRFIFGNQDFSAQSKEFDPLGPLPLGWEKRTDSNGRVYFVNHNTRATQWEDP
RSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSALDNGPQIAYVRDFK
AKVQYFKFWCQQLALPQHIKITVTRKNLFEDSFQQIMSINPQDLRRRLWIIFPGEEGLDY
GGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMAL
FHGKFIDTGFSLPFYKRILNKPVGLKDLESVDPEFYNSLIWIKENNIEECGLEMFFSVDK
EILGEVQSHELKPNGGDILVTEENKEDYIRLVAEWRLSRGVEEQTQAFFEGFNEILPQQY
LQYFDAKELEVLLCGMQEIDLNDWQRHTIYRHYTRTSKQIIWFWQFVKEMDNEKRMRLLQ
FVAGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEK
LLFAIEETEGFGQE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcacaacttcaaatcaccatcatttcagcaaaactaaaagaaaataaaaagaac
tggtttggacccagcccttatgtggaagtctctgtggacgggcagtcaaagaagacggaa
aaatgtaacaacacgcacagtccgaagtggaagcagcacctcacagtaattgtaactccc
atcagtaaattgaattttcgagtctggagtcatcaaacgttgaagtctgatgttttacta
ggaagcgctacactaaacatttatgagacgttgaagactaacaacatgaaactggaggag
gtggtgatgtccttgcagcttcagggtgacagagaacagggagaagcggtcggagacttg
tcagtttgtctagatgggatgcaagtagatcctgagcttttaactaatggggatgcaact
tgtataaacaacactacacaaactaatggatctcggacacagaatgatgcactttcatta
agcacgagtatagctacctctgatatctgtgaagattctgggaccagtgaaagtagggtg
ataaatggaaattctccagcactttccaatggtggccttaaacctgttattcccccaagg
ccttcaagaccacctccccctacaccatacagactctctatttcagcaggtggttccagt
gctccttccgggactgatggatctagcacaacctcggtactaagtacaagtaccaatgca
cctttgcaaaggagtccggaagaaggtgcgactgggatattgaccacaccacctatctcc
agacaaatcatgcccgtaaatcctgcagggtcacgagttgctgctgcacctcagggacct
cttcctccaggttgggaacagagagtggatcagcatggtcgagcatattatgtagatcac
gttgaaaaaagaacaacgtgggatagacccgaacccttgccaccaggctgggaacgtcga
gttgacaacatgggccgaatatactacgtcgatcacatcactcgaacaacaacatggcag
cgaccaacgttggaatctgtgagaaattatgaacagtggcagctacaacgtaaccagctt
caaggagcgatgcagcagtttaaccagaggttcatctttgggaatcaagacttctcagca
cagagcaaagaatttgacccactcggtccattgccacttggttgggagaagagaacagac
agcaatggccgagtctactttgtcaatcacaacacacgggccacgcagtgggaggatccc
aggagtcaaggtcagttgaatgaaaaacctctaccagaaggctgggagatgagatttacc
gttgatgggattccatactttgtggatcacaatagaagaactaccacgtacatcgatcct
cgcactggaaaatctgcattagataatggaccccagatagcctatgtgcgagatttcaag
gcaaaagtccagtatttcaagttttggtgtcagcaactcgcattgccacaacacataaag
attacagtgacaagaaagaacttgtttgaggactcatttcagcagataatgagtattaat
cctcaggacctgagaagacgattgtggattatctttcctggagaagaaggtttagactat
ggaggggtggcaagggaatggttctttctgttgtctcatgaagtgttgaacccaatgtat
tgcctgtttgaatatgcagggaaggataattactgcttgcaaattaatccagcctcatac
atcaaccctgaccacctgaaatacttccgctttattggcaggttcattgcaatggcatta
ttccatgggaaattcatagatactggtttctctttgccattctataagcgcatcctaaac
aaaccagtaggactcaaggatttagaatctgttgatccagagttttacaactctttgatc
tggataaaagaaaacaacattgaagaatgtggtttggaaatgtttttctcggttgacaaa
gaaattctgggtgaagtgcaaagccatgagctgaaacctaatggtggagacattctggtt
actgaagaaaataaagaagactacattaggctagtcgcagaatggcgactctcccgtggt
gtggaggaacagacccaggctttttttgaaggcttcaatgaaattctaccacagcaatat
ctacagtactttgatgctaaagagttggaggtgcttttgtgtgggatgcaagagatcgat
ttgaatgactggcagagacacaccatctaccggcattataccaggacaagcaaacagatc
atttggttttggcagtttgtgaaagaaatggacaatgagaagcgaatgaggctgctacaa
tttgttgctggaacatgtcggcttccagttggagggtttgctgacttaatggggagcaat
ggaccacagaagttttgtattgaaaaagttggaaaggaaaactggctccccaggagtcat
acatgcttcaaccgcctggacctgccaccatacaagagctacgagcaattgaaggaaaaa
ttgctgtttgcaatagaagaaacggaaggatttggacaagaataa
DBGET
integrated database retrieval system
