Geotrypetes seraphini (Gaboon caecilian): 117345841
Help
Entry
117345841 CDS
T09159
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00514
Other types of O-glycan biosynthesis
gsh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117345841 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117345841 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gsh01003
]
117345841 (LFNG)
Enzymes [BR:
gsh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
117345841 (LFNG)
Glycosyltransferases [BR:
gsh01003
]
Glycan extension
O-Glycan
117345841 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF2785
Motif
Other DBs
NCBI-GeneID:
117345841
NCBI-ProteinID:
XP_033770956
UniProt:
A0A6P8P675
LinkDB
All DBs
Position
11:complement(15975707..16008681)
Genome browser
AA seq
375 aa
AA seq
DB search
MLKSCGKKLLLSLIGATFTCLLVLVMDQQHRQVLQSGASEAEGAGPLVWQNARGQEEPAP
GRAAPESPKGFTAYFSTLSRVRREMGPPESSARAERSTPKPPAEEITARDVLIAVKTTRK
FHRARMDLLMDTWISRNKEETFIFTDGEDEELKKRTGNIINTNCSAAHSRQALSCKMAVE
YDKFMESGKKWFCHVDDDNYVNVRTLVKLLSNYPHTQDIYIGKPSLDRPIQATERISENK
MRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMSTAEKIRLPDDCTIGYIIESVLGVK
LIRSNLFHSHLENLQQVSKMEIHKQVTLSYGMFENKRNSIHMKGAFSVEDDPSRFRSVHC
LLYPDTPWCPPNIVY
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagctgcgggaagaagcttctgctgtccctgatcggagctacgttcacctgc
ctgctggtcctggtgatggatcaacagcacagacaagtgctgcagagcggagccagcgag
gctgaaggcgccggccctttagtctggcagaacgcccgggggcaagaggagccggcgccc
ggcagggcggcgccagagagcccgaagggcttcacggcttatttcagcaccctgagccgg
gtgaggagggagatggggccgccggagagctcagcccgagccgagcggagcacgcccaag
cctcccgcggaagagatcacggccagagatgtcttaatcgccgtgaaaaccacccggaaa
ttccacagggcgcggatggatctgctcatggatacctggatctccaggaacaaggaggag
accttcatcttcacagatggcgaggatgaggagctaaagaaacggacaggaaacattatc
aacacaaactgctcggcagcccacagccgtcaagccctgtcctgtaagatggctgtagag
tatgacaagtttatggagtctggaaaaaagtggttttgccatgttgacgatgacaactat
gtgaatgtgcgaaccctagtgaagctattgtcaaattatccccacacccaggatatctac
atcggcaaacccagcttggatcggcccatccaggctactgaaagaatcagtgaaaacaaa
atgcgtcctgtccatttctggtttgccacggggggagctggtttctgtattagccgtggg
ctagcactgaagatgagtccatgggccagcggagggcatttcatgagcacggctgaaaag
atccgtctaccggacgactgcacgattggttatatcatcgagtctgtactgggggtgaaa
cttatccgtagcaacctcttccattcacacctggagaacctccagcaggtgtccaagatg
gaaattcacaagcaggttactttgagctacggaatgtttgaaaataagcggaattccatc
catatgaaaggagctttctctgttgaagatgatccatccaggttccgctccgttcattgc
ctgctgtacccagatactccatggtgtccacccaacatcgtttactag
DBGET
integrated database retrieval system
