Geotrypetes seraphini (Gaboon caecilian): 117346132
Help
Entry
117346132 CDS
T09159
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04514
Cell adhesion molecules
gsh04520
Adherens junction
gsh04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117346132 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117346132 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117346132 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsh01009
]
117346132 (PTPRF)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117346132 (PTPRF)
Protein phosphatases and associated proteins [BR:
gsh01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117346132 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
DSPc
V-set
C2-set_2
Y_phosphatase3
Ig_VEGFR-1-like_5th
PTPlike_phytase
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
117346132
NCBI-ProteinID:
XP_033771428
UniProt:
A0A6P8P905
LinkDB
All DBs
Position
12:complement(74974685..75928094)
Genome browser
AA seq
1827 aa
AA seq
DB search
MVPNSCSLVVFVPLLVLCFLMTWTQADSEPSFIKKPDDQIGISGGVASFVCQATGDPKPR
ITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSIGEINSNAKLT
VLEDDQLPHGFPTINMGPQLKVVEKTRTATMLCAASGNPDPEISWFKDFLPVDPSTSNGR
IKQLRSGALQIENSDESDQGKYECVAANSAGTRYSSPANLYVRVRRVPPRFSIPPSNSEV
MPGGSVNLTCVAVGAPMPYVKWISGLVELTKEDEMPVGRNVLELNNIRESANYTCVAISS
LGMIEATAQITVKALPKPPTDLLVAETSATSVTLTWDSGNLDPISYYVIQYKPKSSEGQF
QEVDSVATTRYSIGGLGPFSEYEFRIIAVNNIGRGAPSSLVEAQTGEQAPSSPPLKVQAR
MLSASTMLVQWEPPEEPNGQIRGYRVYYTTDAHLRFDMWQKHNVDDSHLTTVGSLITGTT
YSIRVLAFTSVGDGPLCDVIQVKTQQGVPAQPTDFQAEAESETSIQLSWLQSPQERITKY
ELLFWEGEDGKQQKVNFAPTSTYTVEGLKPDTLYKFQLAAWSDMGVGVFTSVIEERTTQS
TPSAPPQEVECVSYSSTTIRVSWVPPPASSRNGVITGYSVAYQAVDVEESTKLIVNGIGP
EHTSWEIRDLEKWTEYKVRVRAHTSVGPGPESSPVYIRTDEDVPSAPPRKVEVEPLNSTS
IRVSWKSPSYNRQHGQIRGYQVTYVRLENNEPRSQPIIKDVMLMEAQWKPEEPVEYEMVI
GGLSPDTTYSVTVAAYTTKGDGTRSKPKVVTTTGAVPGKPTMKVSLTKMNTALVEWSPPK
EIIGDLLGYRLQFKRIDKDKMNIIDLSNTDYFYTATSIHKGATYIFRLSAKNKAGLGEEF
EVMITTSEDVPSGFPQNLQVVGLTTSTTEVSWDPPMLSERNGNITNYTVVYRDINSQQDL
INITKDPHITLTNLKPDTTYDIKVRASTSAGSGPLSPSIQSRTMPVEQVFAKNFRVNAVM
KTSVLLSWELPDSYKPAVPFKILYNKQDVEVDGHSMRKLISNLKPDTEYSFVLMNRGSSA
GGLQHRVSIRTSPDILQTKPFFSSKYMKEGQFTLYLPKLQTTAAVSISDLHKGDGGSSGL
TVKDGSTDSCLLGRLADQSSLIGQGTRYGGAAFLISENTRYHIALVAPNDPILDICQILE
EIKMDIKVVVCTELSALSADLRSEIVELGSQVLDFEHNLKEHHDAITSLEITSQNFLTSV
IGPQAISDHVMVLVDMESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGV
PGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTATIVMMTRLEEKSRVKC
DQYWPCRGSETYGMIQVTLLDTVELATYTMRTLALYKNGSSEKREVRQFQFMAWPDHGVP
EYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERMKPEKTVDIYGHV
TCMRAQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLYAHIQKLTQVPPGESVTSME
LEFKLLANSKAHTSRFISANLTCNKFKNRLVNIMPYELTRVCLQPIRGVDGSDYINASFI
DGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSAR
YQYFVVDPMAEYSMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIG
QVHKTKEQFGQDGPITVHCSAGVGRSGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPA
MVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaattcctgctcgctggtggtgtttgtaccattacttgttctatgctttttg
atgacttggacacaggcagacagtgagccaagtttcattaagaaaccagatgatcaaatt
ggaatttcaggaggagtggcctcttttgtttgccaagcaacaggtgaccctaaaccacgc
attacttggatgaagaaggggaaaaaagtcagctcccagcggtttgaggtgattgaattt
gatgatggttcaggatctgtgctcagaattcagcctcttcgggtccatcgggatgaagcc
atctatgaatgcacagcaaccaacagcattggagagattaacagcaatgccaaattaaca
gtgttagaagacgaccagcttccacatggtttcccaactattaacatggggccccaactg
aaagtagtagagaaaacccgtacagctacaatgttatgtgctgctagtggaaatcctgac
cctgaaatctcatggtttaaagactttcttcctgtggacccttccactagcaatggacga
attaagcagctccgctcaggggctcttcagatagagaacagtgatgaatctgaccaagga
aaatatgagtgtgttgcagccaacagtgcaggaacccgctactcttctccagcaaacctt
tatgttcgagtgcggcgagttccacctcgattttctattcctcccagcaactctgaagtg
atgcctggagggagtgtgaatctgacttgtgtggcagtaggtgctcctatgccttatgtg
aagtggattagcgggttagtggagctaacaaaagaggatgagatgccagttgggcgtaat
gtcttggaactaaataacattcgggaatctgctaactacacctgtgtggctatatcctcc
ttgggtatgatcgaggccacagcccaaatcactgtcaaagctttgccgaaaccgccaaca
gacctgctggtggcagaaacaagtgctacaagtgtgactctgacttgggactctgggaac
ttggatcctatctcttattatgttattcagtacaaaccaaagtcctcagaagggcagttt
caggaggtggacagtgtagctactactcgctacagcattggtggactcggccctttctca
gaatatgagtttcggattattgccgtgaacaatattggcagaggtgctcctagtagcctg
gtggaagcacagacaggagaacaggctccctccagtcctcccttgaaagtccaggcacgc
atgctgagtgctagtactatgcttgtacagtgggaaccacctgaagagccgaatgggcag
attcgagggtaccgtgtatattataccacagatgcccatttgcgctttgatatgtggcag
aaacacaatgttgatgacagccatcttaccacagtaggcagcctgattacagggaccaca
tacagcattcgtgtattggccttcacatctgtaggagatggacctctctgtgatgtcatt
caagtcaaaacccaacaaggcgtgccagctcagccaactgatttccaagctgaagccgag
tctgaaacaagcatccagcttagctggctgcagtcaccccaggagcgcatcaccaagtat
gagctactcttttgggagggtgaggatggcaaacagcaaaaagtaaactttgctcccaca
tctacatatacagtagaaggtctgaagcctgacaccttgtacaagtttcagttggcagct
tggtctgacatgggagttggcgtatttacctcagtcattgaagaaaggactacacagtct
accccttctgccccaccccaagaagttgagtgtgtaagctacagctccaccaccatccgg
gtaagttgggtacccccaccagcctctagccgaaatggagtcatcactgggtactctgtt
gcataccaagcggtggatgtagaggaaagcaccaaactcatagtgaatggaattggacca
gagcacaccagctgggagatcagagacttggagaagtggactgagtacaaagtgagggtc
agggctcacacaagcgttggtcctggaccagagagctcccctgtttatatacgcaccgat
gaggacgtgcccagtgctccaccacgcaaggtggaggtagagcccctgaattcaacatcc
attcgtgtgtcctggaaatcaccaagctataataggcagcatggacagatccgaggttac
caggtcacttatgttaggttggaaaacaatgagccacgaagccaacccattattaaagat
gtaatgctaatggaggctcagtggaaaccagaagagcctgtggagtatgagatggtcata
ggaggactttctccagatacaacctactctgtgacagtagcagcctacaccaccaaagga
gatggtacaagaagcaaacccaaagttgtgacaacaacaggagcagtgcctggaaaaccc
actatgaaggtcagtctcacaaagatgaacacagctcttgttgagtggagcccacccaag
gaaataataggcgatttgctgggttatcgactgcaatttaagcgcattgacaaagacaag
atgaatattatagatttgagcaatactgattatttctatactgctaccagcattcacaag
ggtgcaacttacatctttagactttctgccaagaacaaagctgggcttggagaagagttt
gaggttatgatcactaccagtgaggatgtgcccagtgggtttccccagaacctacaagtt
gtagggctcactacttcaaccactgaggtatcctgggacccacccatgctgtctgaaaga
aatggaaatattaccaactatactgtggtataccgagacatcaacagccaacaggacctt
atcaatatcaccaaggaccctcacatcacccttaccaatctgaagcctgacacaacctat
gatatcaaagtaagagcatccaccagtgcaggaagtggtcctcttagtcccagcatccag
tctaggactatgcctgtggaacaagtgtttgcaaagaatttccgtgtaaatgctgtgatg
aaaacatctgtattgttgagctgggaactgcctgactcctataagcctgcagtacctttt
aagatcctgtataataaacaagatgtggaggtggatggtcactccatgagaaaacttatc
agtaacctgaagcctgatactgagtattcctttgtattgatgaatcgtggaagcagcgct
ggtgggcttcagcacagagtttccatccgcacatccccagacattctgcagactaaacct
ttcttctccagcaaatacatgaaggagggccaatttaccttgtatcttccaaagctgcaa
accactgcagctgtgagcatctcggaccttcataaaggtgatggtggtagtagcggctta
actgtgaaagatggatctacagattcatgcttacttggcagactggctgatcagagctcc
ctcattggccaagggacgagatacggtggagcagcttttctaatctctgaaaacaccagg
tatcatattgctctggtggccccaaatgatcctatcctggatatttgccagattcttgaa
gaaataaaaatggatataaaagtagtagtttgcactgaactttcagctttatcagcagat
ctgcggagcgagatagtggagctgggcagccaagtgctggactttgaacataatctgaag
gaacatcatgacgcaattacttccttggaaataacttcacagaatttccttacttctgtc
attggcccgcaggccatttctgatcatgtaatggtgctggtggatatggagtcaatagac
cccggacagcagttcacctgggaaaattctaacctggaagttaataagccaaagaatcga
tatgcaaacgtgattgcttatgaccactctcgtgtcattctgacctccatagatggtgta
cctggcagtgattacatcaatgccaactacattgatggatacaggaagcagaatgcatac
atcgccactcaaggaccactgccagaaacattgagtgatttctggagaatggtgtgggaa
cagagaactgctaccattgtcatgatgacccggctagaagagaagtctcgggtaaaatgt
gaccagtattggccatgtcgtggctctgagacttacggaatgatccaggtgacccttctg
gacacagtggagttggctacatacactatgagaacattggcactttacaagaatggctct
agtgagaagagagaggtccgacaattccagttcatggcatggccagatcatggtgtccca
gagtatccaacccctatcctggcctttttaagaagggttaaagcttgtaacccacctgat
gcaggtcctatggtggtacactgtagtgctggtgtgggcagaacaggatgcttcatagtt
attgatgccatgctagagagaatgaaacctgagaagacagtagacatctatggtcatgtg
acatgcatgagagctcagaggaactacatggtacagacagaagaccagtatatctttatt
catgaagccctgctagaggcagctacatgtggaaacacagaagtaccagccaggaacctt
tatgctcatatacagaagctaacccaggtgcctccaggagagagtgtcacatcaatggaa
ctggaatttaagctcctggccaattctaaagcacatacctcacgttttattagtgccaac
ctaacctgcaacaagttcaagaaccgcttggtgaacattatgccatatgagctaaccaga
gtctgcttgcagcccattcgaggtgtcgacgggtctgactatatcaacgccagtttcata
gatggctacagacagcagaaagcatacattgctacacaaggaccactggctgaaactaca
gaagatttctggcgtatgctctgggagcacaactctaccattgtggtgatgttaaccaaa
ctgagagaaatgggacgggagaagtgccatcagtactggcctgcagaacgttcagcccga
taccagtattttgtggtggatcccatggcagagtacagcatgccgcagtacatcctccgt
gagttcaaagtcacagatgccagggatggccaatcaagaacgatccgacagttccagttc
acagactggcctgaacaaggagtgccaaagacaggggagggctttattgactttattggg
caggtgcacaaaaccaaggagcagtttgggcaagatggacccatcactgtacactgcagt
gctggtgttggtcgctcaggagtgtttatcactcttagtattgttctggagcggatgagg
tacgagggggttgtcgatatgttccagaccgtgaagactttgcgaacacagcgaccagcc
atggtgcaaacagaggaccagtatcaactgtgctaccgagcagcactcgagtaccttggc
agttttgatcactatgcaacataa
DBGET
integrated database retrieval system
