KEGG   Geotrypetes seraphini (Gaboon caecilian): 117346693
Entry
117346693         CDS       T09159                                 
Name
(RefSeq) lymphotoxin-alpha-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04010  MAPK signaling pathway
gsh04060  Cytokine-cytokine receptor interaction
gsh04150  mTOR signaling pathway
gsh04210  Apoptosis
gsh04217  Necroptosis
gsh04350  TGF-beta signaling pathway
gsh04620  Toll-like receptor signaling pathway
gsh04621  NOD-like receptor signaling pathway
gsh04622  RIG-I-like receptor signaling pathway
gsh04625  C-type lectin receptor signaling pathway
gsh04920  Adipocytokine signaling pathway
gsh05132  Salmonella infection
gsh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117346693
   04350 TGF-beta signaling pathway
    117346693
   04150 mTOR signaling pathway
    117346693
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    117346693
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    117346693
   04217 Necroptosis
    117346693
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    117346693
   04621 NOD-like receptor signaling pathway
    117346693
   04622 RIG-I-like receptor signaling pathway
    117346693
   04625 C-type lectin receptor signaling pathway
    117346693
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    117346693
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117346693
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117346693
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:gsh04052]
    117346693
   00536 Glycosaminoglycan binding proteins [BR:gsh00536]
    117346693
Cytokines and neuropeptides [BR:gsh04052]
 Cytokines
  Tumor necrosis fators
   117346693
Glycosaminoglycan binding proteins [BR:gsh00536]
 Heparan sulfate / Heparin
  Cytokines
   117346693
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 117346693
NCBI-ProteinID: XP_033772566
UniProt: A0A6P8PAL2
LinkDB
Position
12:118706735..118712782
AA seq 235 aa
MSADNVALDPEKGGLIVIRESRRSDHCWRYLSIFSILLLLGVSTFLTLLHFRIIPQFGHP
APNDLPNEQKAESAKLYETPQLMKLQALKENKPAAHLVGNKENNGLVWSENELENQDDDH
SPKMEVRNNELIIPAGGLYFVYTQVVYTGSVCQKGPIHLAHTVNHISTELERKNPILSAS
KTACENRAFKEAWFHTLYEGAVFRLNKGDRLSTETLETSRLYDAPGQIYFGAVAL
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcgcagacaatgtggcgttggaccccgagaagggagggctcatcgtaatccgggag
tccaggcggagcgaccactgctggagatacctcagcatcttctccatcctccttctgttg
ggggtcagcacgtttctgacgctgctccacttccgcatcatcccgcagttcggccaccca
gcaccaaatgacctcccaaatgaacagaaggcagaatccgctaaattatacgagacgccg
cagctgatgaagcttcaagcgctgaaagagaacaagccggcagcccacttagttggaaac
aaggagaacaacgggctggtttggtccgagaatgagctggaaaaccaggatgatgaccat
tcgccgaaaatggaggtccggaataatgagctgatcattcccgccgggggcctctatttt
gtctacacccaggtggtctacacgggcagcgtttgccagaagggcccgatccacctcgcg
cacaccgtgaaccacatttccaccgagctcgagaggaagaatcccattctaagtgcctca
aagacggcctgcgagaatcgggctttcaaagaagcctggttccacaccctctacgaggga
gcggtcttccggctgaataagggcgaccggctctccacagagactctggaaacctcccgc
ctttatgacgcccctggccaaatctacttcggggcagtggccttgtga

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