Geotrypetes seraphini (Gaboon caecilian): 117347238
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Entry
117347238 CDS
T09159
Symbol
AP4B1
Name
(RefSeq) AP-4 complex subunit beta-1 isoform X1
KO
K12401
AP-4 complex subunit beta-1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117347238 (AP4B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117347238 (AP4B1)
Membrane trafficking [BR:
gsh04131
]
Endosome - Golgi transport
Others
AP-4 complex
117347238 (AP4B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT
HEAT_2
PDS5
EntA_Immun
Motif
Other DBs
NCBI-GeneID:
117347238
NCBI-ProteinID:
XP_033773778
UniProt:
A0A6P8NSF1
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Position
13:8828121..8849197
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AA seq
736 aa
AA seq
DB search
MPYLGSEETVKELRRALCNPHVQADRLRYRNVILRVIRCMTQGVDVSGVFAEMVKASATV
DIVQKKLVYLYMCTYAALKPDLALLAINTLCKDCSDPNPMVRGLALRSMCNHRMPGLHEY
IQQPILNGLRDKASYVRRVAVLGSAKMYTQQGDLEIDGTLVNELYSLLRDPDPIVIVNCL
RALEEILQREGGVVINKPIAHHLLNRMKDLDQWGQSEVLRFLLRYKPRTEEEIFDILNLL
DSFLTSSKPSVVLGTTKLFLILARGFPHVQADVLSRVKGPLLAVCTSESRELCFTALCHV
REILRSLPGHFGAHYKKFFCSYSEPHYIKCQKMEILCELVNDDNVQHVLEELRGYCTDVS
TDLAQAAIFAIGRIARTYGEKCVVILTELLALKDEHITSAVVQTFRDLVWLCPPCTEAIC
QVLPGCEENIHDSEGKQALIWLLGVHGEKVANASYILEDFAENVKTEASPMVKMELIVAL
VQLFVVRPAECQDMLGRLLHYCIDEETNMAVRDRGLFYYRLLLAGIEEVKRVLAVPKSDP
SLGVLEDRAVQPIDAWALDFNTLVPVYGKEQWAVLTTCWKSELNVEGTEPSKAEQPVSEE
KKAAPSSQSDAGPLTLKLDAQMEPELFESQWKMLISAHVTSAGWQEDVHPDALQMALQDV
SIYTIAMSKAGTEPWKAYLFAQEQEGQGLFLTELLLEPDKSAMCITVKQSNGQEESLRSF
VALLKNVIELFVDLKS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgccttatctcggatctgaggagacggtgaaggagctgaggagagctttatgtaaccct
catgtccaggcagaccgactcagatacagaaatgtaattctcagagtgatcaggtgtatg
acgcagggagtggatgtctctggtgtctttgcggagatggttaaagccagtgccacggtc
gatattgttcagaagaagttggtgtatttgtacatgtgcacttatgctgcgctcaaaccc
gatctggctctcctggccatcaacacgctctgcaaagactgctcggaccccaatccgatg
gtgagagggttggccctgcgcagcatgtgcaaccacaggatgccaggcctccatgaatat
attcagcagccaattttaaatggacttcgagacaaagcttcatatgtgaggagagtggct
gtcctgggttctgcaaaaatgtacacccagcaaggagacctggaaattgacggaactcta
gtgaacgaactgtacagtctgctgagggacccagatcccattgtgatagtgaactgcctg
cgagcgctggaggaaatactgcagcgggaagggggcgtggtgatcaacaagcccatcgct
catcatctcctaaacagaatgaaagatttggaccagtggggacaaagtgaggtgttaaga
tttcttctccgttacaaaccccgaactgaagaggagattttcgacatcctcaacctgctg
gacagttttcttaccagcagtaaacccagtgtggtcttgggaaccaccaagctcttcttg
atcctggcccggggcttcccccatgtgcaggcagacgtactgagcagagtgaaagggcct
ctgctggctgtctgcacatcggagagcagggagctctgcttcacggccctgtgccacgtg
agggagattctgcgtagcttgccaggccatttcggtgcccattacaagaagttcttctgc
tcgtactcggagccgcactacatcaagtgtcagaagatggaaatcctgtgtgagctggtg
aatgatgacaatgtacagcatgtgctggaagagctgaggggttactgcacagacgtttcc
acagatcttgcacaagctgccatctttgctatcggtcgcattgcgagaacatatggtgag
aaatgtgttgtcattttaactgaactgcttgctctaaaagatgaacacattacttcagct
gttgtacaaacatttcgggaccttgtgtggctgtgtcctccgtgcactgaggccatttgc
caagttctgcccggttgtgaggaaaacatccatgacagcgagggaaagcaggcactgatt
tggctcctgggagttcatggagagaaagtcgctaatgcttcttatattttggaggacttt
gcagagaatgtgaaaacggaagcgtccccgatggtgaaaatggagttgattgttgctctg
gtccagctttttgttgtgcgtccggcagaatgccaggatatgctcggacgcctcctgcat
tactgcatagacgaagagactaacatggctgttcgagaccgtggactgttctattaccgt
ctgttactagctggcattgaagaggtgaaacgggtcctggctgtccccaaatctgaccca
tctttaggggttctggaggatcgggcagtgcaacctattgatgcctgggcgttggacttc
aacacactggtgccagtttacggcaaagagcagtgggcagtcctcacaacttgctggaaa
tctgagcttaacgtggagggcaccgagccctcaaaagcagagcaaccggtttcagaagag
aaaaaggcggctccctccagtcagtctgacgccggccctctgaccttaaagctggatgca
cagatggaaccagagttgtttgagagtcagtggaagatgctgatttcggctcatgtgacg
agtgcaggctggcaagaagatgttcatcctgatgccctgcagatggctttacaagacgtt
agtatctacaccattgcaatgagcaaggccggcactgagccctggaaagcctacctcttt
gcacaagaacaggagggtcaaggactgttcctgacagagctgctcctggaacccgataag
tcagcgatgtgtatcacagtgaaacaaagcaacggacaagaagagtcactaagaagcttt
gttgccttgttgaagaatgtcattgagttatttgtagatctgaagtcttaa
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