Geotrypetes seraphini (Gaboon caecilian): 117347718
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Entry
117347718 CDS
T09159
Symbol
PKP1
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117347718 (PKP1)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
117347718 (PKP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
Adaptin_N
V-ATPase_H_C
Atx10homo_assoc
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
117347718
NCBI-ProteinID:
XP_033774904
UniProt:
A0A6P8NV73
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Position
13:complement(16001878..16094328)
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AA seq
771 aa
AA seq
DB search
MLASPAPLKTALAYDVFQGQNDSSLAVPSDKLLLNRTSGDQRVKEQVMMTVRRQKPRSSQ
SSTLQSSTLNYNTRGSMYEGMNDNYNTGRTQFYSKQQVGNSSWGYPQQVFNGTLKKDTDN
KRFSSYSQMENWSRQYKSLGSPTSPGSDFIYMQNLKNSRSEPDLTAEPRATLRKQSQLQA
QRVGGGGGGGGGRTTQSRYSFYSNYSTQPSIQQKKRGFTPTRTPSSISGARQEVYGNGHT
HMYNTMQKQESYSGTQYNTLQKPDIYGAANIPIRLDSKDEFDSGMPIDKAVELLSCQDEK
YQISGAYNIQHACYQDENAKNRVCQLNGIEKLIFLLQSPNHNVQQAAAGALRNLVFKNTA
NKIETSRRGGIREAVHLLKRTTNPELQKQLTGLLWNLSSTDELKPELIREALPVLTDNVI
IPYSGWSEHNTHSQRIGIDPEVFFNATGCLRNLSSADAGRQTMRNCKGLVDSLVHYGQTC
VSNNQADDKSVENCTCILHNLSYHLDSEVPNKYTELTEKQNYMARNSETDKTSMGCFSNK
SEKVQNNNFELPLPEEESNPKGANLLFHSNTIRMYLALLGLSRKDSIMEACAGALQNLTA
SKGLMSNGMSQIIGMKEKGLPQIARLLQSGNSDVVKTGTSLLSNLSRHPSLHKSMGNQIL
PDVARLLSQPVGSNTSNSEDILSSACYTMRNLVMADPQLGKQNLSGGLLNNIVNMCKNSN
SPKAAEAARVFLSDMWSQKEFQGILKQQGLDKNMMGALTGSTLRNAISRAF
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcctccccagcccccttaaagaccgcgctggcttatgatgtgttccaagggcag
aacgactcttccctagctgtgccctcggacaaacttctgctgaacaggacctcaggggac
cagagggtgaaagagcaagtgatgatgacagtcaggagacagaaacccaggtcatcccag
tcttccacactccagtcttccacactgaactacaacactcgaggttcaatgtacgaaggc
atgaatgacaattataacaccggtcgaactcagttttactccaagcagcaagtaggaaat
tcctcctggggttatccgcagcaagtcttcaatgggacccttaagaaggatacagacaac
aagcgtttcagctcttacagccaaatggagaactggagcaggcagtataagtcattgggc
agccctaccagcccgggcagtgattttatctacatgcagaatttaaagaacagccggagt
gagccagacctgactgctgagccccgtgccacgttaagaaaacagagccagttgcaagca
cagagagtaggaggaggaggaggaggaggaggaggaaggacaacgcagagccgatacagc
ttttacagcaactacagcactcagccaagcatccagcagaagaagaggggcttcacccca
acacgcacgccatcctccatctcaggtgccagacaggaagtctacggaaatggccatacc
cacatgtacaacacgatgcaaaaacaagaatcatactctggaacccaatacaatacgctc
cagaagccagacatatatggagctgcaaacatacccataagattggattctaaagacgaa
tttgatagtgggatgcctattgataaagcagtagaacttctgtcttgccaggatgagaag
taccagatctctggagcctataacatccagcatgcgtgctaccaggatgagaatgctaaa
aaccgggtctgtcagctaaacgggatcgagaaactcattttcctgctgcagagcccaaac
cataatgttcagcaagcggctgcgggggcccttcggaatctagtgtttaagaataccgcc
aacaagattgagaccagtcggcggggtggcataagggaggcagtgcacctcctgaagagg
acgaccaaccctgagctgcagaaacagctaacagggctcctctggaatctttcctctact
gatgagctgaaaccagaactgatccgggaagctttgcccgttttgaccgacaatgtgatt
attccgtactctggctggtctgaacacaacacccattcccaaagaattgggattgatcca
gaagtgttcttcaatgctacagggtgtttgaggaacctgagttctgcagatgctgggcgc
caaaccatgcggaactgtaaaggactggtcgattctcttgtgcattatggccagacctgt
gtatctaacaaccaggctgatgacaagtcagtagagaactgtacctgcattctgcacaac
ctctcataccacctggactctgaggtgccaaataaatacaccgaactgaccgagaagcag
aactacatggccaggaacagtgagacagacaaaacctccatgggttgtttcagcaacaag
agcgagaaggtgcagaacaacaactttgaattgcctcttcctgaggaagagtccaatccc
aagggggcgaacctgctcttccattccaataccatccggatgtacctggctctgctggga
ctgagcaggaaggattccattatggaagcatgtgccggggccttgcagaacctcaccgcc
agcaagggactgatgtccaatggaatgagtcagattattgggatgaaggagaagggtcta
ccacagattgcacggctccttcagtctgggaattcagatgtggttaagactggcacctct
ttgctaagcaacctatctcgacatccttcattacacaaatccatgggtaaccagatactt
ccagatgttgctcgtctgctgtcacagccagtggggagcaacaccagcaactctgaagac
attttgtcatctgcgtgctacaccatgaggaatctggtgatggctgatcctcagctgggt
aaacagaacctatctggcggcctcctgaataatatcgtgaacatgtgcaaaaacagcaac
tcacctaaagcggctgaggcagcccgtgtgttcctgtccgacatgtggtctcaaaaggag
ttccagggcattctcaaacagcaaggactggataaaaacatgatgggagctttaactggt
agcactctaaggaacgccatatcaagagccttctaa
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