KEGG   Geotrypetes seraphini (Gaboon caecilian): 117349571
Entry
117349571         CDS       T09159                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM alpha chain
  KO
K06752  MHC class II antigen
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04145  Phagosome
gsh04514  Cell adhesion molecules
gsh04672  Intestinal immune network for IgA production
gsh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117349571
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117349571
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    117349571
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117349571
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gsh04147]
    117349571
Exosome [BR:gsh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117349571
  Exosomal proteins of epithelial cells
   117349571
  Exosomal proteins of breast milk
   117349571
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3
Other DBs
NCBI-GeneID: 117349571
NCBI-ProteinID: XP_033779044
UniProt: A0A6P8P5U0
LinkDB
Position
16:54900587..54909735
AA seq 249 aa
MGVLAVSLCLAFSLLHGGEGESGSEVYHVMSQVLYCQFGHPQVGLVDTCEDDEMFHFDFT
SQHGVARLPVFQQLADEAYDPSLIKDDAEVCQRSRETFSKYLTSVIAESKGFPVGKVFTR
TPLQLGKPNTLICYVSNFFPPTLNITWKMNGEPVRAGVTTTDAYPTQDWGFYMFSYLDII
PTLHDIYSCHMAQEGEVYSSITYWVPDNPIPSDLLETVLCAVAFGIGVICLIAGFVLIVM
SQRPQCIGN
NT seq 750 nt   +upstreamnt  +downstreamnt
atgggggtcctggctgtcagcctctgcctggctttcagcctcctgcacgggggagaggga
gagtccggttccgaggtgtatcacgtcatgtctcaggtgctctattgccagtttgggcat
ccgcaggtggggctggtggacacttgtgaggacgatgagatgtttcactttgattttacc
agccaacatggcgtggcaaggctgcctgtgtttcagcaattggcagatgaagcctatgac
ccctcactgatcaaggatgatgcagaggtgtgccagaggagcagagaaactttttccaaa
tatttgacgtctgtcatagccgagtccaaaggtttccctgtaggaaaagttttcaccaga
acccctctgcagctgggaaaacccaacaccttaatctgttacgtcagcaacttcttccca
cctacgttgaacatcacctggaaaatgaacggtgaacctgtgagggccggggtcaccact
acagacgcctaccccactcaggactggggattctatatgttctcctatcttgacatcatt
ccgactttacatgatatatacagttgtcacatggcccaggaaggggaggtgtacagttcc
atcacatactgggtgccagacaatccgatcccgtcagacctgttggagacggtgctgtgt
gctgtggcctttggtattggagttatttgtctcatcgcgggatttgttctcattgtgatg
tcacagagacctcagtgcataggcaactga

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