Geotrypetes seraphini (Gaboon caecilian): 117349981
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Entry
117349981 CDS
T09159
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00310
Lysine degradation
gsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117349981 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117349981 (SETDB1)
Enzymes [BR:
gsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
117349981 (SETDB1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117349981 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
117349981 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
53-BP1_Tudor
DUF4537
DUF489
Motif
Other DBs
NCBI-GeneID:
117349981
NCBI-ProteinID:
XP_033779694
UniProt:
A0A6P8P7L0
LinkDB
All DBs
Position
16:complement(38649952..38687215)
Genome browser
AA seq
1327 aa
AA seq
DB search
MTVLTQQSHAIPLHTVYTFFCLRRCRRVVTLLIKQSLAITSLAGMDSQELMELQEAVVQE
LGISLEELRQFIDEEVDKIECVKQRKAQLVKLESWVQEKEAEVAHVDKLFDSASSAVDDC
EMLVKDLYNKLGLKYKESSSEDEDPAHKTTEVIEIFDEEEDDDILSVGSGDGVNKTPKDQ
ALLREAMAAMRKSAQDVQKFMDAVTKKSDGPPGRASSLPSSPTSSLGGSQQMSSGTVGGD
LSKDGDLMVGMRILGKKRTKTWHKGTLIAIQSMGTGKKYKVKFDNKGKSLLSGNHIAYDY
HPFPEKLFVGSRVVAKYKDGNQVWLYAGIVAEPPNVKNKMRFLIFFDDGYASYVVQSELY
PVCRPLRKSWEDIEDVSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEGTWWKSKVEEVD
GSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSNASSQEKKQGGPQRTRPNVGAVRSKGP
VVQYTQDLSSSGTQFKNTDSIIPPPPPPPPLPPPPPLSPHQLIDMDPENQLALYRKQVAK
KSTSFRPGSVGSGQSSPVSPVLSEPPSSTRPSGAQQPRYLSGQAVTGAIHQYHGMTDRVP
VEPSYRAPTEKLFYLPHVCNYACLSRVRHTRNDQLRGKNPLLIPLLFDFRRMTARRRVNR
KMGFHVIYKTPCGLCVRTMPEIERYLFETECNFLYLEMFCLDPYVLVDRKFQPQKPFYYI
PDITFNREDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTSWEFLVGCDCTDGCRDRS
RCACHQLTIQATACTPGGQMSNTAGFQHKRLDECLPTGVYECNKRCKCNQVMCTNRLVQH
GLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDH
IESVENFKEGYESDAKCSSDSSGVDLKEEERENSGSEEQDESNDDSSDDNFCKDEDFSTS
SVWRSYATRRQTRGQRENGLSETTSKDSGIIRQVSHEDTGSCKLPVSEETSKNKVASWLS
SNMSDTLHDSDSRSSLRLGDSDIRLSRGESSEADKPVTSGLVHKETAGLDTESRILKRED
SAKDSEENRFPVLGESGRLYGYNPSPSKPEGIRRPPSKTSMHQTRRHSAPAQTTTDDVLT
LSSNSDSEAESGRKPAAQAQAQAATNDSDDIQTISSGSEDEAEEDKKNSGAIGPVKRQVA
VKSTRGFALKSTHGIAIKSNAMASGEGGMRRNTRQFYDGEESCYIIDAKLEGNLGRYLNH
SCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGST
ECRGRLL
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgactgttctcacccagcaaagtcatgcaataccactacatacagtatacacgttcttc
tgtctccgacgctgcaggcgtgtagtgactcttctaatcaagcaaagtcttgcaattaca
agcctggcaggaatggattcccaagaacttatggagcttcaagaagcagttgtccaagag
ctggggatttccctggaggagctgcggcaattcatcgatgaggaagtcgataagatcgag
tgtgtcaagcagcggaaagcccagctggtgaagcttgaaagctgggtgcaggagaaggaa
gctgaagtggcccacgttgataagttatttgacagtgcttccagtgctgtcgatgactgt
gagatgcttgtgaaagatctgtacaacaagctgggcctgaaatataaagagagtagttcg
gaggatgaagaccctgctcacaagaccacagaggtgatagaaatctttgatgaagaggaa
gacgatgacattctcagtgttggttcaggtgatggtgttaataagacaccaaaggaccag
gctttgctgcgggaagccatggctgccatgaggaaatctgcccaagacgttcagaagttt
atggatgcggtcacaaaaaaatcagatggccccccgggccgagcctcctccctcccttcc
tcacccaccagctccttgggagggtctcagcaaatgagctctgggactgtagggggcgac
ctcagcaaggacggtgacctgatggttggcatgcggattctgggaaagaaaaggaccaag
acttggcataagggaactctgatcgcaattcagtccatgggtaccggcaagaagtacaaa
gtaaagtttgacaacaaagggaagagcctcctttcaggcaatcatattgcttacgactat
cacccctttccagagaagctgtttgtggggagccgggtggttgcgaagtacaaggacgga
aaccaagtgtggctttatgctgggattgtggctgagcctccaaacgttaaaaacaagatg
aggttcctgatcttctttgacgatggctacgcatcctatgtcgttcagtcggagctgtac
ccagtctgcaggcccttgaggaagtcttgggaggacatagaggatgtttcctgtcgggat
tttattgaggagtacatcaccgcctacccgaaccgccccatggtcttgctcaagagtggg
cagctgattaaaaccgagtgggaggggacctggtggaaatccaaggtggaggaagtggat
ggcagcctcgtcaaaatcctctttctggatgacaagcggtgcgagtggatttaccgcggc
tccacgcggctggagccgatgttcagcatgaagacctccaacgcctccagccaggagaag
aaacaaggggggccacaacgaacccgccccaatgttggtgcagtgaggagcaaaggaccc
gttgtgcagtatacgcaagacttaagcagttccggtacccagtttaaaaatacagattca
ataattcctccaccaccaccgccgcctccgcttcctccgcctccacctctgtctcctcat
cagcttattgatatggacccagaaaatcagctggctctgtacagaaagcaggtggccaag
aaaagcacctccttccgtccaggctcagtggggtccggccagtcgtcgcctgtctcgcct
gtgctcagcgagcctccttccagcacaagacccagtggagctcagcagcccaggtacctc
tcgggtcaggcagtcactggcgctatccatcagtaccacggcatgacagaccgggtgcct
gtggagccctcctaccgagctcccacggaaaaactcttctacctgcctcacgtgtgtaac
tacgcctgcctttctcgggtacgacacacgaggaacgaccagctccgtggcaaaaatccc
ctgctgatcccactcctgtttgacttccgccgcatgaccgcccgccgccgtgtcaaccgg
aagatgggcttccatgttatctacaagacgccatgtgggctgtgcgtacgcaccatgcct
gagattgaacgttacctctttgagacagaatgtaactttctgtacctggagatgttctgc
ctggacccctacgtgctggtggaccgcaaattccagccccagaagcctttctattacatc
cccgacatcaccttcaacagggaggacgtgcctctgtcctgcgtcaatgagatcgacacc
accccgcctccacaggtagcctacagcaaggagcggatccccggcaagggagtcttcatt
aacaccagctgggagttcctggtgggctgtgactgcactgatggctgccgggacagatcc
agatgtgcgtgccaccagctgacaatccaagcgacagcttgcactccaggagggcaaatg
agcaacacagccggcttccaacacaagagattggacgaatgtctgcccacaggagtctac
gagtgtaacaagaggtgcaaatgcaaccaggtcatgtgcaccaaccgcctggtccagcac
ggcttgcaagtgcggctgcagctcttcaaaacgcagaacaagggctggggcatccgctgt
ctggatgatatcgccaaaggctcctttgtttgcatctatgcagggaaaatccttacagat
gactttgctgacaaggagggtctggagatgggtgatgagtactttgctaacctggaccac
atcgagagtgttgagaacttcaaggaaggctacgagagcgacgctaagtgctcatcagac
agcagtggtgtagatctcaaggaagaagagagggagaacagtggcagcgaggagcaggac
gagtccaacgatgacagctcagatgacaacttctgcaaggatgaggatttcagcaccagc
tctgtatggcgtagctatgccacccggcggcagaccaggggtcagagagagaacggcttg
tcagagaccacctccaaggactctgggatcatccgacaggtcagccacgaggacactggt
tcttgtaagctacctgtctctgaagagacctccaagaacaaggtggcatcctggctgagc
tccaacatgtcggacacattacacgattcagacagcagatcatccttaagactgggagac
tccgatatcagactgagcagaggggagtcctcagaggctgataagcccgtaacctctggc
ctagtacataaagagactgctggcttggatacagaatctaggatcctgaaaagagaagac
tcggcaaaggactctgaagagaacaggtttccagttttaggagaaagcggccgactgtac
ggctataacccaagcccgtccaaacctgagggcatccgaaggccacccagcaagaccagc
atgcaccagacgaggagacactcggcacctgcacagaccaccactgatgatgtcttgaca
ctgtccagcaattcggacagcgaagcagagtccggccgcaagccagccgcccaggcccaa
gcccaggccgcaaccaacgacagcgatgacattcagaccatctcctcagggtcggaagac
gaggcggaggaagacaagaaaaattcaggtgccatcggtcctgtgaagagacaggtggcc
gtcaaatcaaccagaggatttgctctgaaatccactcacggaatcgccatcaagtctaac
gccatggcttcgggagaaggtgggatgcggaggaacacacggcagttctatgacggcgag
gagtcctgttacattatcgacgccaagctagaagggaaccttggccgctacctgaatcac
agctgcagtcccaatctgtttgtgcagaatgtgtttgtggacactcatgaccttcgcttc
ccttgggtagccttcttcgccagcaagagaatccgagcaggcacggagctcacctgggat
tataactacgaggtgggcagcgtggagggcaaggaattgctttgctgctgcggttcgaca
gagtgccggggccgtcttctataa
DBGET
integrated database retrieval system
