Geotrypetes seraphini (Gaboon caecilian): 117350034
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Entry
117350034 CDS
T09159
Name
(RefSeq) SLA class II histocompatibility antigen, DQ haplotype C beta chain-like
KO
K06752
MHC class II antigen
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04145
Phagosome
gsh04514
Cell adhesion molecules
gsh04672
Intestinal immune network for IgA production
gsh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117350034
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117350034
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117350034
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117350034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsh04147
]
117350034
Exosome [BR:
gsh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117350034
Exosomal proteins of epithelial cells
117350034
Exosomal proteins of breast milk
117350034
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_beta
C1-set
Ig_3
ig
Ig_2
I-set
C2-set_3
Psg1
C2-set_2
MHC_I
Motif
Other DBs
NCBI-GeneID:
117350034
NCBI-ProteinID:
XP_033779816
UniProt:
A0A6P8PX74
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All DBs
Position
16:complement(54792321..54809202)
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AA seq
271 aa
AA seq
DB search
MDLQLIHRCQICCALMVILTVLRTDVTYCRDIPKDFVAEVKGECHYSNGGRDVRLLARWF
YNMEEFVYFDSQVGWFIAKTEFGKTTADSWNNNTAIIEQKRNEVERVCKNNYEAAEAGTV
IGRQVKPDVTVSPMKTGSSGEQHRLACYVNGFYPSAIKVKWLRNQVEDTSSVISTELLQN
GDWTFQILVILETELQRGDTYTCEVEHSSLKEPLKMDWELQTSKSAKNKQLTGIVGFVLG
AVFIIVGLIIFLKNNKGASRLQIPVNEGLLN
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggatttacagctgatccaccgctgccagatctgttgtgcgttgatggttatcctgacc
gtgctgaggactgatgtgacttactgcagggatattccaaaggattttgtggcagaagtg
aagggcgagtgtcactacagcaacgggggccgggacgtcaggctcctggcgcgatggttc
tataacatggaggagttcgtgtactttgacagccaggtgggctggttcatcgccaagacg
gagttcgggaaaacgacggcggattcttggaacaataacacggcgatcatagagcagaaa
cggaatgaggtggagagagtctgcaaaaacaactacgaggcagcggaggcagggactgtc
atcggacggcaagtaaagcccgatgtgacggtgtcgcccatgaaaactgggagctccggt
gaacagcacagactggcctgctacgtgaatggtttctacccctccgcaatcaaggtgaag
tggctgcggaaccaggtggaggataccagcagcgtgatatccactgagctcctgcagaac
ggagactggaccttccagatcctggtgatcctggagactgaactccagcgcggagacacc
tacacgtgcgaggtggagcacagcagcctaaaggaacccctcaagatggattgggagctt
caaacctcaaagtctgcgaagaacaagcagctgacgggaatagtggggttcgtgctgggg
gccgtgtttatcattgtgggattgatcattttcctgaagaataataaaggtgcatctcga
cttcaaattcctgtgaatgaaggtctcctgaattaa
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integrated database retrieval system
