KEGG   Geotrypetes seraphini (Gaboon caecilian): 117350051
Entry
117350051         CDS       T09159                                 
Name
(RefSeq) DLA class II histocompatibility antigen, DR-1 beta chain-like
  KO
K06752  MHC class II antigen
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04145  Phagosome
gsh04514  Cell adhesion molecules
gsh04672  Intestinal immune network for IgA production
gsh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117350051
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117350051
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    117350051
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117350051
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gsh04147]
    117350051
Exosome [BR:gsh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117350051
  Exosomal proteins of epithelial cells
   117350051
  Exosomal proteins of breast milk
   117350051
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 ig I-set Ig_2 Psg1 MHC_I C2-set_3 C2-set_2
Other DBs
NCBI-GeneID: 117350051
NCBI-ProteinID: XP_033779862
UniProt: A0A6P8NU03
LinkDB
Position
16:complement(54752087..54776837)
AA seq 270 aa
MDLQLIHRCQICCALMVILTVLRTDVTYCRDIPKDFVVEVKSECHYSNGGRDVRFLERYF
YNMEEFVYFDSQVGWYIAKTEFGKPTADSWNNNTAIIEQERNLEERFCRYNYGVFDALIV
QRRVKPDVTVSPMKTGSSGEQHRLACYVNGFYPSAIKVKWLRNQVEETSSVVSTELLQNG
DWTSQILVILETELQRGDTYTCEVEHSSLKEPLKVDWELQTSKSAKNKQLTGIVGFVLGA
VFIIVGLIIFLKNNKGASRLQIPVNEGLLN
NT seq 813 nt   +upstreamnt  +downstreamnt
atggatttacagctgatccaccgctgccagatctgttgtgcgttgatggttatcctgacc
gtgctgaggactgatgtgacttactgcagggatattccaaaggattttgtggtagaagtg
aagtcggagtgtcactacagcaacgggggccgggacgtcaggttcctggagcgctacttc
tataacatggaggagttcgtgtactttgacagccaggtgggatggtacatcgccaagacg
gagttcgggaaacccactgcggattcttggaacaataacacagcgatcatagagcaggaa
cggaatttggaggagagattctgcagatacaactacggggtgtttgatgccttgatcgtg
cagcggagagtaaagcccgatgtgacggtgtcgcccatgaaaactgggagctccggtgaa
cagcacaggctggcctgctacgtgaatggtttctacccctccgcaatcaaggtgaagtgg
ctgcggaaccaggtggaggagaccagcagcgtggtatccactgagctcctgcagaacgga
gactggacctcccagatcctggtgatcctggagacggaactccagcgcggagacacctac
acgtgtgaggtggagcacagcagcctaaaggaacccctcaaggtggattgggagcttcaa
acctcaaagtctgcgaagaacaagcagctgacgggaatagtggggttcgtgctgggggcc
gtgtttatcattgtgggattgatcattttcctgaagaataataaaggtgcatcccgactt
caaattcctgtgaatgaaggtctcctgaattaa

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