KEGG   Geotrypetes seraphini (Gaboon caecilian): 117350579
Entry
117350579         CDS       T09159                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain
  KO
K06752  MHC class II antigen
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04145  Phagosome
gsh04514  Cell adhesion molecules
gsh04672  Intestinal immune network for IgA production
gsh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117350579
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117350579
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    117350579
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117350579
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gsh04147]
    117350579
Exosome [BR:gsh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117350579
  Exosomal proteins of epithelial cells
   117350579
  Exosomal proteins of breast milk
   117350579
SSDB
Motif
Pfam: C1-set MHC_II_beta Ig_3 C2-set_2 Ig_2 ig DUF3784 Neurensin
Other DBs
NCBI-GeneID: 117350579
NCBI-ProteinID: XP_033780813
UniProt: A0A6P8Q168
LinkDB
Position
16:54915770..54927675
AA seq 260 aa
MRGTRGLALLLCWALLCNPTGTFVTQFNRDCVYGDGTKEVGFYYYVVFNKQVMLQYDPNE
KLFLPYPSYLSQVHEAVINITTFLNTKPGFLDKIQKKQLQCQTNREKYWGSTVLRTVSPK
VQIAATESWSKTKTWNLVCYVFEFYPAAVNVTWLKNGYPITDNLSEVLPNGDWNYQTQLR
VDVTPQSGDSYTCSVEHASRQEPYQENWEPGLTVRQKVKISVSVVVLALGLIFLITGLIC
WMKSRHGYTLIPGYSYPEVS
NT seq 783 nt   +upstreamnt  +downstreamnt
atgcgggggacccgggggctggcactgctgctctgctgggccctactctgcaacccgaca
ggtacgtttgtcacacagtttaacagggactgcgtctatggggacggcaccaaggaggtg
ggattttactactatgtggtcttcaacaagcaggtaatgctacaatatgaccccaatgaa
aagctcttcctcccctacccttcgtacctcagccaagtgcacgaggcggtcataaacatc
accactttcctgaacacgaagccaggcttcctggacaagatccaaaagaaacagctccag
tgccagacaaatagagagaagtactggggaagcacggtgctgaggacagtttcccccaag
gtgcaaatcgctgccacggaatcttggagcaagaccaaaacgtggaatcttgtgtgctac
gtgttcgaattctaccctgcggcagtgaacgttacctggctaaagaacgggtaccctatt
acagacaacctgtctgaggtgttacccaacggtgactggaactaccagacacagttaaga
gtagacgtcacaccacagagcggggacagctacacctgcagtgtcgagcatgctagcagg
caagagccctaccaggagaactgggagcctggactgacagtgcgacagaaggtgaagatc
agtgtgtctgtagtggttcttgccttggggttaatcttcctcatcactggcctcatatgc
tggatgaaatctcgtcacggctacaccctcatcccaggatacagctatccagaagtctct
taa

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