Geotrypetes seraphini (Gaboon caecilian): 117351117
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Entry
117351117 CDS
T09159
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117351117 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gsh01007
]
117351117 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsh03016
]
117351117 (IARS1)
Enzymes [BR:
gsh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
117351117 (IARS1)
Amino acid related enzymes [BR:
gsh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117351117 (IARS1)
Transfer RNA biogenesis [BR:
gsh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117351117 (IARS1)
Prokaryotic type
Other AARSs
117351117 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
117351117
NCBI-ProteinID:
XP_033781816
UniProt:
A0A6P8NZ32
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All DBs
Position
17:complement(34165617..34359807)
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AA seq
1267 aa
AA seq
DB search
MVQQVSENISFPSEEEKILQLWKSLDCFQECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVERRFGWDCHGLPVEYEIDKMLGIKGPEDVAKMGISEYNKQC
RGIVMRYAQEWEISINRLGRWIDFKNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVNFPLEEDESVSLVAWTTTPWTLPSNLALCVNP
DLQYVKLKDNSTGKIYILMEARLVSLYKAKDEYEVLDKFSGIVLKGKKYKPLFPYFLKCK
ENGAFTVVVDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTA
EVTDFAGQYVKDADKNVIKLLKERGRLVHASTVKHNYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLLENNGQCYWVPDFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVSDDFEEVVC
VGSMAELAELTGVNVTDLHRESIDHLTIPSRCGKGVLCRVTEVFDCWFESGSMPYAQVHY
PFENKREFEDSFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPVHIVNSYGADALRLYLINSPVVRAENLRFKEDGVRDVLKDVFLPWYNAY
RFLMQNILRLHKEDGIELFYNENTSKESKNIMDKWILSFTQSLIQFFKIEMAAYRLYTVV
PRLVRFVDMLTNWYVRMNRRRLKGENGNEDCIMALETLFSILFSMCRLMAPFTPFITEMM
YQNLRTLIDPSSVQEKDSLSIHYLMLPQVRENLIDKQIESAVSRMQSVIELGRVIRDRKT
IPIKYPLKQVVVIHQDPEALKDIRSLEKYILEELNVRQVTVSTDKNKYGIRLRAEPDHMV
LGKRLKGAFKNVMASIKDLKSEQLEEFQKSGTIVVDGHELHEEDLRLMYTFDQVTGAEAQ
FEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKGNLVPTDEITVYYRSQPDGE
YLDSVIKVHTDFIFATIKAPLKPYPVPTSTKIVIQEKTELKGSELEITLVKGKSSVAAPL
SGPLCAYVNLNISINGTEQGGVLLLENPKGDDRLDFAKLKEVVCSIFGLQNKKLSVFHGK
TELIKEMDLLSLSGKTLQVTSGSAVSVISNSDSPLCQYINIQLLNAEPQECLNGVVGTLL
MENPVGKNGLLYQGLLHEIAKMFGLRSRRLKLYMDQDQREEITDGTSMKSLNTKTVYVQV
LPITAES
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggttcagcaagtttcagaaaacatcagctttccctctgaagaagagaagatactacag
ctttggaagagccttgattgtttccaggagtgtttgaaacagtccaaaaacaggcctaaa
tataccttttatgatggtcctccatttgcaacaggacttccgcattatggccatatactg
gctggaacaattaaagacatagtcaccagatttgctcatcagagtggatttcatgttgag
agaagatttggatgggattgtcatggcttgcctgtggaatatgaaattgataagatgctg
ggaatcaagggaccagaagatgttgccaaaatgggaatttcagaatacaataagcagtgt
aggggaattgttatgagatatgcccaggagtgggagatcagcattaacaggctgggccga
tggattgattttaagaatgactataagacgctctatccttggttcatggaaactgtctgg
tgggtgttcaaacagctgtatgataaaggattggtctaccgaggggtgaaagttatgcct
ttctctactgcatgcaacactcccctttccaactttgagtctcatcagaattacaaggat
gtacaagacccctcggtgattgtgaactttccactggaagaagatgaaagtgtctctttg
gtggcttggacaacgacaccgtggactctgccaagtaatcttgctctgtgtgttaatccg
gacttacagtatgtgaaactcaaagataatagcacaggaaaaatttatattttgatggaa
gctcggctggtatcactttacaaagctaaggatgaatatgaagtacttgacaagttctca
ggcattgtactaaaaggcaagaaatataaaccactgtttccatattttctgaagtgtaaa
gagaatggtgcttttacggtggtagttgacaactatgtcaaggaagaggaaggtaccgga
gttgtacaccaggctccttactttggtgctgatgactatagagtctgcatggacttcaat
attattcagaaagattctgttccagtttgccctgtcgatgcatcaggctgcttcactgca
gaagttacagattttgcgggtcaatatgtcaaggatgcagacaagaacgttatcaaacta
ctgaaggaacgagggcgacttgtgcacgctagcactgtgaagcataattatcctttctgc
tggaggtcagacacgcctctgatttacaaagctgtgcccagttggtttgtgcgggttgaa
cacatggtagacaaacttctagagaacaacggtcaatgctattgggttccagattttgta
agggagaagagatttggaaactggctgagggatgcacgtgactgggctatttccagaaac
agatactggggaacaccgatccctttgtgggtcagtgatgactttgaagaggtggtctgt
gtggggtcaatggcagagttggcagagttgactggcgtaaatgtgacagatctccacagg
gaaagcattgatcacctgactatcccatcccgctgtggaaagggggtgttgtgtcgagtg
actgaagtttttgattgctggtttgagagtgggagcatgccatatgctcaggtgcattat
ccatttgaaaataaaagagagtttgaagattccttccctgccgactttattgctgagggc
attgaccagaccagaggatggttttatactttgctggtactttctacagctctttttggg
aagccacctttcaagaatgtaattgtaaatgggctggttctggccagcgatggccaaaaa
atgagtaaacgcaagaagaactatccagatcctgtacacattgtaaacagctatggtgct
gacgcactaagattatacctcatcaattctcctgtggtaagagcagagaacttgagattc
aaggaagatggtgttcgtgatgtgctgaaggatgttttcctgccttggtacaatgcatac
cgttttctcatgcagaacattttgaggcttcataaggaagatggaattgagttattttac
aatgaaaacacatctaaggaaagcaagaacatcatggataagtggattctttctttcacg
cagtcactaattcagttcttcaagattgagatggcagcttacagactgtacactgtagtg
ccaaggctagttagatttgttgacatgctaacaaactggtacgtccggatgaatcgccga
aggttaaagggtgaaaatggcaacgaagactgcattatggctctggaaaccttgtttagt
attctgttctctatgtgcaggctaatggcacccttcacaccgtttattacagaaatgatg
taccagaacttgaggactttgattgacccctcttctgttcaagaaaaggattcccttagt
attcactacttaatgcttccccaagtgagggagaatctgattgacaaacaaattgaaagt
gcagtttcacggatgcagtctgtcattgaacttggccgtgtgatccgtgacaggaaaact
attccaataaagtatcctctgaagcaagtggtggttattcatcaggaccccgaagctttg
aaggacatcagatctctggaaaagtacattcttgaggaactaaacgtgcgtcaggtgact
gtatccactgacaaaaacaaatatggaattcgattgagagcagagcctgatcacatggtg
cttggaaaacggctgaaaggggcctttaagaacgtaatggcatctattaaggatctaaag
agtgaacagctagaagaattccaaaaatcaggcaccattgttgtagacgggcatgagcta
catgaggaagatctacgactcatgtacacatttgaccaggtcacaggagcagaggcccag
tttgaggctcattctgatgctcaggttttggttctcttagatgtcacaccagatcagtcc
atggttgatgaaggagtcgcccgtgaagtaattaatcgcatccaaaagcttagaaaaaag
ggcaatttggttcctacagatgaaataacagtttattaccgatcccaacctgatggggaa
tatctggattctgtaatcaaagttcatacagactttatttttgctactatcaaggctcca
ctgaaaccatacccagtgcctacctctacaaaaattgtcatccaagaaaagacagagctg
aaagggtcagagctggaaattacacttgttaaagggaagtcatctgttgcagctcctctt
tctggccctttgtgtgcctatgtcaatctcaacatttctattaatggcacagaacaaggt
ggtgtgctgctcctggaaaatcccaaaggagatgatagacttgattttgccaaactaaaa
gaggttgtttgcagtatatttggtttgcagaataagaagttgtctgtgtttcatgggaaa
acagaattgataaaagaaatggacttgttgagtctcagtgggaagacactacaagtgaca
tcagggtcagctgtctctgtgatcagcaacagtgattcgcctctctgccagtatatcaac
atacagctactgaatgcagagccccaagaatgcctgaatggagtagtaggaactctgctg
atggaaaacccagttggtaaaaatggacttctgtaccaaggacttttgcatgagatagca
aaaatgtttggcctcaggagcaggagattaaaattgtacatggatcaagatcagagagag
gaaattacagatggtacttcaatgaagtctctaaatacgaagactgtgtatgttcaagtt
ttacccataactgctgaaagctga
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