Geotrypetes seraphini (Gaboon caecilian): 117352172
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Entry
117352172 CDS
T09159
Symbol
NR1H3
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03320
PPAR signaling pathway
gsh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117352172 (NR1H3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117352172 (NR1H3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117352172 (NR1H3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gsh03310
]
117352172 (NR1H3)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117352172 (NR1H3)
Nuclear receptors [BR:
gsh03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
117352172 (NR1H3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
117352172
NCBI-ProteinID:
XP_033784310
UniProt:
A0A6P8PR11
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Position
19:13663110..13708878
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AA seq
420 aa
AA seq
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MGSSSMASMHLTAQGHEKGLQCVFGMEEDGPAFSHSSEIPLEHKDNINIAEIFPTKRKKG
PAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKSAQYVCKNGGKCEMDMYMR
RKCQQCRLRKCHEAGMQEQCVLSEEQIRLKKMRKQEEEQARGVPSQQSPSLSFPEIPSLT
PDQVLMIEKLVAAQHQCNQRAYADRLKVTPWPLISEPQNREARQQRFAHFTELTIISVQE
IVEFAKQLPGFLDLTREDQIALLKTSTIEVMLLETSRRYNPEIECVTFLKDLSYSREDFA
KAGLQFEFINPIFEFSKGMTDLKLDDAEFALLIAINIFSADRPNVQDHRLVEQLQQTYVE
ALHSYICIHRPNDQLMFPRMLMKLVSLRTLSCVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctcaagcatggcctcaatgcatcttacggcacaaggccacgagaaggggcta
cagtgtgtgtttgggatggaagaagatggaccagcatttagtcacagttctgagattcct
ctcgagcacaaagataacatcaatatcgctgagatttttcccacgaagaggaagaagggg
ccagccccaaagatgctggggaacgaggtgtgcagcgtgtgtggagacaaggcgtccggc
ttccactacaacgtgctgagctgcgagggctgcaagggcttctttcgacgcagcgtcatc
aagagcgcgcagtatgtctgcaaaaacggcggcaagtgtgaaatggacatgtacatgcga
aggaagtgccagcagtgccgcctgcgcaagtgtcatgaggcaggcatgcaggaacagtgt
gtgctatccgaggagcagattcggctaaaaaagatgagaaagcaggaggaggagcaggct
cgtggggtcccatcgcagcagagcccctcactcagttttccagaaattccatcactgact
ccagatcaggtcctaatgatagaaaaactcgtggctgcacaacaccagtgcaaccagagg
gcgtatgcggacagactgaaagtgacgccatggccactgatttctgaacctcagaatagg
gaagcacggcagcaacgctttgcacattttacagagctgaccatcatatctgtgcaagaa
attgttgagtttgcaaagcagcttccaggattcctcgaccttaccagggaagatcagatt
gcattgctgaaaacctccactattgaggttatgttgctagaaacgtcccgacggtacaac
ccagagatcgaatgtgtgactttcctgaaagatctgagctatagccgtgaagactttgct
aaagctggtcttcagttcgagttcattaatccgatctttgagttctccaagggaatgact
gacttaaagctggatgatgcagaatttgctttattaattgccattaatatcttttctgca
gatcgtcccaatgtccaagatcatcgcttggtggaacagcttcagcagacatatgtggag
gcccttcattcatacatttgtatacacagacccaatgatcaactcatgttcccacgtatg
ctgatgaaattagtcagtctacgtaccctcagttgtgtccactcggagcaggtgtttgcg
cttcgactgcaggacaagaagctgccacccctcctgtctgagatttgggatgttcatgag
tag
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