Geotrypetes seraphini (Gaboon caecilian): 117352231
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Entry
117352231 CDS
T09159
Symbol
BDNF
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117352231 (BDNF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gsh04052
]
117352231 (BDNF)
Cytokines and neuropeptides [BR:
gsh04052
]
Cytokines
Growth factors (RTK binding)
117352231 (BDNF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
NTF3_N
Spaetzle
DUF2270
PhoLip_ATPase_N
Motif
Other DBs
NCBI-GeneID:
117352231
NCBI-ProteinID:
XP_033784422
UniProt:
A0A6P8P5G7
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Position
19:2400036..2431969
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AA seq
294 aa
AA seq
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MPLYKTLVRPHLEYCVWFWRPHLQKDLKRMESVWTKATKLFHQVRRVMTIFFLTMVISYF
SCMKAAPMKETSVRGQGSLSYPGFRTYGTLDSVGGPKASSRGGLPSLVDTFEHVIEELLE
DEQNTRPSEENKDADLFSSRVMLSSQVPLEPPMLFLLEEYKNYLDAANMSMRVRRHSDPA
RRGELSVCDSISEWVTAVDKKTAVDMSGQMVSVLEKVPVSKGQLKQYFYETKCNPMGYMK
EGCRGIDKRYWNSQCRTTQSYVRAFTMDSKKKVGWRFIRIDTSCVCTLTIKRGR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtataagactctggtgagacctcatttagaatattgtgtttggttctggaga
ccacatcttcaaaaagatctaaaaaggatggagtcggtctggacgaaggctactaaactg
ttccaccaggtgagaagagtgatgaccatctttttccttactatggttatttcatacttc
agttgcatgaaagctgccccgatgaaagaaacaagtgtccgaggacaaggcagcttatca
tacccagggtttcggacctatgggacactagacagcgtaggcggacctaaggccagttca
agaggaggactgccgtcgttggtagacacttttgagcacgtcattgaggaactgctggag
gatgagcagaacacgaggcccagcgaggagaacaaagatgcggacttgttttcttcccga
gtcatgctgagcagccaagtgcctttggagccccccatgctctttctgctggaggagtac
aaaaactatttggatgcggcaaacatgtccatgagggtccgccgtcactcagaccctgct
cgccggggggagctgagcgtatgtgacagtattagtgagtgggtgacagcagttgacaaa
aaaacggcagtggacatgtcggggcagatggtcagcgtcctagagaaggttccagtgtcc
aaaggtcagctcaagcaatatttctatgagactaagtgcaaccccatggggtacatgaaa
gagggctgcaggggcatagacaagaggtactggaactcccagtgccgaactacccagtcc
tatgtgcgagctttcaccatggatagcaagaagaaagttggttggcggttcatccgaata
gacacctcttgcgtatgtacattgaccattaaaaggggaagatag
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