Geotrypetes seraphini (Gaboon caecilian): 117353904
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Entry
117353904 CDS
T09159
Symbol
FYCO1
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117353904 (FYCO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117353904 (FYCO1)
Membrane trafficking [BR:
gsh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117353904 (FYCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
DUF4200
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
117353904
NCBI-ProteinID:
XP_033786308
UniProt:
A0A6P8PQY2
LinkDB
All DBs
Position
2:complement(354314325..354562493)
Genome browser
AA seq
1513 aa
AA seq
DB search
MMAASPGENQLERIIRDLHDAVTELSNEFKETGEPITDDSNALHKFSYKLEYLLQFDQKE
KFTLLGSRKDYWDYFCDCLAKVKGANDGIRFVKSIAELKTSLGKGRAFLRYSLVHQRLAD
TLQQCFMNNKVTSDWYYARSPFLKPKKNSDIVGQLYELTEIQFDLAPRDYDLDAAWPTFA
RRTLIVPGSHVHMWKPPSRSSSMNSLLSGYLQAQERSPSFDGNNSLQIEPLESLDDMCIK
FDESEIRQNEMKSHIEFLEKANQELKGNLVIQKEQSRIDKLASHSTMEENTRLTKMIANL
QKQCEVSHSTKNTIQELQNCLQVLEQNAARKREEYQVKVDQLESENTRYKSQLKPLTQEL
ETTKTVIAVKDMDMDELKVKLASSEQKNLDLIAKIDTALSEKEEQTATRYESVLKVHELL
VKLRKAEEVQKEAETKLSDLDIASKEEIMKLQERIATIEGEVNQLQKDLTEEKMLVAHLE
EQRKDSLVHSKLLNETLQETRREKEKIQEALIDQKNAHDHQIRDLMEQVQFQEDRLSHQN
ENVQNLEKLKSHLTGDREHLDKTVRDLEGHIHQQTMEFSEVTDKMKKLQMENEDLRLIKN
NLEENQKGLVKSKENLEGELAKLRSSEKQLQSQIEDAMVSVDEKEKSLREENKTLYEDLQ
NAIRQMQMVKEALYALKEDYKELKQREDEIRGSFSALEEEHKNTELHIAKLEKSRSSMKR
IEDSLRKEMNEKDIVLQEKESQNKELLEKLEGCRKQILVLQEEKEIMEKASLNQTKLIET
LTRQKDNLEKIQLEQTDFQLQAEEMISRLSFAEQQWECHLSEVSKLQMKVAELTSKLQQV
TEEKDGIKGKLSSTEVVLGEHTSVVQQLKEQIETLNRKHVVDLVPCKEKEEVMKKEEEEI
LHRAKLENHMPCLREELVKKKEYVGVARLDNMESKDNLNKSHTDMAELGVQVCAIIAEKK
DAEQKLSLVNEQLREMKRLSMNEKEGLHGDVATLRHENENLQEKLRELEESAVTVSVLQT
KLSEAEKQAKSLQEDSEEEISALKFQLSANVINYQSKLKAVAEESERATQKLEHERQKRT
AVEEEVVELKVSHSDLLEQLSKTQIQLTDYESTLSMHEDEKVSLKKNLERTQTELTKAGD
QVKEYQDKLTKAETERQNNEQKLMANVDDLMRTKQFLEERLIELIRDKDALWQKSDALEF
EQKIRAEERWLVDTEVNHCLDCQKPFSWMVRKHHCRLCGRIFCYYCSNNYVMTKHSSKKE
RCCQACFNKFNSVVDSETETETEAGKQPAQQASDTLHTYDVTVTDEASKILEDTVFHIIT
DEELNEVQDTDSIQTESHTEDSPDHSTAELNNSFNSLFPDDSEDFQGTQENEICLLKSGE
LTLRLPLTLEDISNFGDSNRELFIRSGTYSTICLTVAEVGITVSWLFSSDTKSISFSVVY
QESEDALLDQCKVLIPMTRCNSHKEIIRGQLKVRNTGIYTLIFDNTFSRFISKKVLYHLT
VERPVVYDGSDLL
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgctagtcctggagagaaccagttagaaaggatcatcagagatttacatgat
gctgtgacggagttaagcaatgagtttaaagaaaccggggagcctatcacggatgacagt
aatgccctgcataagttctcctacaagctcgagtacctcttgcaatttgaccagaaggaa
aaatttacacttctgggaagcaggaaagactactgggattacttctgtgactgtctagcc
aaagtgaaaggagctaatgatggaatccgctttgttaagtctattgcagagctgaaaact
tccctgggaaaggggagagccttccttcggtactctctggtacatcagcgtctggctgac
accctacagcagtgcttcatgaacaacaaggtcaccagtgactggtattatgcaagaagt
ccttttttgaagcccaagaaaaattcggatattgttggccaactgtatgagctgactgag
attcaatttgacttggcaccaagggactatgatttagatgctgcatggccaacatttgca
aggaggacactgattgtacctggctcccatgtacatatgtggaaaccgcccagtcgcagt
tctagtatgaatagtttattgagtggatacttgcaggcacaagaacgctcccccagtttc
gatggcaataattctttacaaatagaaccactggagagcttagatgatatgtgcattaag
tttgatgaatcggaaatcagacagaatgagatgaagagccacatcgagtttctggaaaag
gctaaccaagagctaaagggcaatttagttatccaaaaagagcaaagccgaatagacaag
ctagcaagtcatagcactatggaagaaaacactaggttaaccaaaatgatagcgaactta
caaaaacaatgtgaagtctcccattcaactaagaatacaattcaggagttgcagaattgc
ctgcaggttctggaacagaatgcagccagaaagcgagaggaatatcaagtgaaggttgat
caattggaatctgaaaatacgaggtataaatcacagctaaagcctttgactcaggaactg
gaaaccaccaagacagttattgctgtaaaagacatggacatggatgagctcaaggtaaag
ctagcatcttctgaacaaaaaaatcttgatcttattgcaaaaattgacactgctttgagt
gaaaaagaagaacaaacagctactcgatatgaatctgtccttaaagttcatgaactactt
gtaaaactacgcaaggcagaagaagtacaaaaagaagctgaaacaaaattaagtgatctt
gatatagcatctaaagaggaaattatgaaactgcaggagagaattgcaaccatagaaggt
gaagttaaccagcttcaaaaagatctcacagaagagaaaatgttagttgcacatcttgaa
gagcagcgcaaggattcattggtacattctaaattactgaatgaaactcttcaagaaaca
agaagagaaaaagaaaaaattcaggaagcactcattgatcaaaaaaatgctcatgatcat
caaataagagacttaatggaacaagtacaatttcaggaagaccgtctgtcacatcagaat
gaaaatgtacaaaaccttgaaaaactgaaaagtcatcttaccggtgatagagagcacctc
gataaaactgtaagagacttggagggacacattcatcagcaaacaatggaatttagtgaa
gtcactgataagatgaagaagctgcaaatggagaatgaagatctgagactaataaagaat
aatctggaagaaaaccagaaagggctagtgaagtcaaaagagaatctggaaggtgagtta
gcaaagctgagatcatctgagaagcagctgcagagtcagatagaggatgccatggtgtct
gtggatgaaaaggagaaaagccttcgggaagaaaataaaaccttgtatgaagacttgcaa
aatgcgatcaggcagatgcaaatggtaaaagaagcactatatgctttaaaagaggattat
aaagaacttaagcagcgggaagatgaaataagaggttctttctctgcattagaagaggag
cataagaatacagaactacatattgccaagctggagaaaagtcgatcttctatgaaacgg
attgaagactctcttaggaaggagatgaatgaaaaggatattgtgctgcaagagaaggag
agccagaataaagagttgcttgaaaagttggagggatgcagaaaacaaatcttggtttta
caagaagaaaaggaaattatggaaaaagcatcacttaatcaaaccaaactcattgaaacc
ttgaccagacagaaagacaatctggagaaaatacagttggagcaaactgattttcaacta
caggcagaagaaatgatttccaggctctcttttgcagagcaacaatgggaatgtcatttg
tctgaagtgtctaagttacagatgaaggttgcagaactgacatcaaagcttcaacaggtg
acagaagaaaaagatggaattaagggcaagctgagttccacggaggttgttcttggtgag
cacacatcagtggttcagcagctgaaagaacaaattgaaacactgaacaggaagcatgtg
gtagatctcgtgccatgcaaagaaaaagaggaggtgatgaaaaaggaggaggaagaaata
cttcacagagcaaagttggagaaccatatgccatgccttcgagaagagctagtgaagaaa
aaggagtatgtaggtgtggctagattagacaatatggaatccaaagataaccttaataag
tcacacacagacatggcagaactaggtgtccaggtctgtgccataatagctgagaaaaaa
gatgctgagcagaagctcagtctggtcaatgagcagctccgagaaatgaaaaggctgtcg
atgaacgagaaagaagggcttcatggtgacgtggccactctcaggcatgagaatgaaaac
ctgcaagagaaactgagagagctggaggaaagtgctgtgaccgtttctgtgttacagacc
aaactgagtgaagcagagaagcaggcgaaaagcttgcaggaagatagcgaagaagagatc
tctgccctgaagtttcaactgagcgcaaatgttataaattatcagagtaaactgaaggct
gttgctgaagaatctgagcgtgcaacacagaaacttgagcatgagaggcaaaaacggact
gctgtagaggaagaagttgtggagctgaaggtttcacactctgatctactggagcagctg
agcaaaacccagatccaactgacagactatgaatcaaccctgtctatgcatgaagatgag
aaagtgtcattaaagaagaacttggagaggacacaaacagaactcaccaaagcaggtgat
caagtcaaagaataccaagacaagctgaccaaggcagagacagagaggcagaataacgag
cagaaactgatggccaatgtggatgatttaatgcgaaccaagcagttccttgaggagcga
ttgatagagctaatcagagataaggatgccctttggcagaaatctgatgcattggaattc
gaacagaagatccgagcagaagagcgatggctggttgacacagaagttaatcattgccta
gattgtcagaagccgtttagctggatggtgcggaaacatcattgccgtttgtgcggtcgc
attttctgctactactgcagcaacaactatgtgatgacgaaacacagcagcaagaaggag
cgttgctgtcaggcttgctttaataaattcaacagcgtggtggattctgagactgagact
gaaactgaagcaggaaaacaaccagcccagcaagcctcagatacactacatacctatgat
gtcactgttacagatgaagcctccaaaatacttgaagatacagtgtttcatattatcaca
gacgaagaacttaatgaagtgcaagatactgactccatccagacagaaagtcacactgaa
gactcgccagaccatagtactgcagaactgaataactcatttaattcactgtttcctgat
gactcggaggatttccaaggcacacaagagaatgaaatatgcctgttgaagtctggagaa
ctgacgttaagactgcctctcactctggaagacatttcaaattttggggatagcaacagg
gagctgttcatcagatctggcacctatagcactatctgcctaacggtggctgaggtgggc
attacagttagctggttgttttcttctgacacaaagagcatatccttcagtgttgtctac
caggaatctgaagatgcccttcttgaccagtgcaaggttcttattcctatgacacggtgt
aattcccacaaggaaatcatcagagggcagctgaaagtcagaaatactggcatttacact
ttgatatttgacaatactttctccaggttcatctcgaaaaaggtgctttatcatctgaca
gtcgaacggcctgtggtgtatgacgggagcgatcttctttag
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integrated database retrieval system
