Geotrypetes seraphini (Gaboon caecilian): 117355899
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Entry
117355899 CDS
T09159
Symbol
TNFRSF11A
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117355899 (TNFRSF11A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
gsh04050
]
117355899 (TNFRSF11A)
04090 CD molecules [BR:
gsh04090
]
117355899 (TNFRSF11A)
Cytokine receptors [BR:
gsh04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117355899 (TNFRSF11A)
CD molecules [BR:
gsh04090
]
Proteins
117355899 (TNFRSF11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RANK_CRD_2
TNFR_c6
SUR7
DUF6377
SfLAP
Chordopox_A13L
DUF2685
TMEM154
DUF7198
Motif
Other DBs
NCBI-GeneID:
117355899
NCBI-ProteinID:
XP_033790881
UniProt:
A0A6P8QWE7
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Position
2:complement(222854294..222962776)
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AA seq
657 aa
AA seq
DB search
MTLGHGTGRFIRGWMLVSIFLSGKQVSRQDSNGCESEKHYLHAGHCCMKCAPGHYLHTKC
NATSSDTTCLPCGPNQYMNVWNDEDKCLRQKLCDPGKGLVMVNSGNSTFQRECACKPGYH
WMRAFEFCTRNTVCGPGFEAEMPSHNDRDTICKECQPGYFSSNSSATEKCKLWTNCSASG
MIEEVPGTTETDASCVYHESDIVLQIVIFSILFLCVTLVVLIIFVVHHRKKVKTVTADLQ
NWVNEACNSIKGNKEKSHNAINKVCMNAICRQHSEGMFLLTLDEKSFSENVCCFNGHPPC
GQGCLDARHCHFEEDTLILSLKSEDGQLRHGPTENEYVYNGLQRVSCLDASGQPESKPAS
SFAEPLEVEEDLSFSQCFTGTEDMLDGDGSCESGILCGTGYICASSHHSTYCTCKESAED
DQKATTPSHLSLEQINNGSQVHEMSRRESHRKWRKPLDSKIPLSSEEHFPHCPCSHTSLE
NSADTDTSFDCNDAKQQNTEASGISNSCTTDVPSPSGNVTGNSNSTFISSGQVMNFKGDI
IVVYVSQNSQEAPAASGTCDGNMGSPVQEENQYRCDSFVANTQLHHTKSSDTYQACTTEG
KELNSERRSLGTVFQEETRGCQHSGSCHRNVASLPIQEEGKSEHLSKEAWKGENIRT
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgggccacggaaccggccgcttcatccgaggctggatgttggtctccattttc
ctcagcgggaagcaggtatcacggcaggattctaatggctgtgaaagcgagaagcattat
ctgcatgcaggtcactgctgcatgaaatgtgcaccaggacactatctgcatacaaaatgc
aatgccacttcttctgataccacatgtctgccatgtggcccgaaccagtatatgaatgtg
tggaacgatgaggacaaatgcttacggcaaaaactgtgtgatccaggtaaaggtttagtg
atggtgaattctgggaacagcaccttccagcgagagtgcgcctgcaaaccgggataccac
tggatgcgtgcttttgaattctgtacaaggaatacagtctgtggtcctgggtttgaagct
gagatgccatcacataatgacagagacaccatctgcaaggaatgccagccagggtacttc
tctagcaattcgtcagccactgaaaaatgtaaactttggaccaattgctcagcctcaggg
atgatagaagaagttcctgggaccacggagacagatgccagttgtgtgtatcatgagtcg
gatattgttttgcaaattgtgattttttctatcctttttttgtgtgtgacgttggtggtc
cttatcatctttgttgtgcaccataggaagaaggtgaaaacagtgacagcagatttgcag
aactgggttaatgaagcatgcaacagcataaaaggaaataaggaaaaatcccataatgct
attaataaagtatgcatgaacgctatctgccggcagcactccgaaggcatgtttctgctg
actcttgatgagaaaagtttctcagaaaatgtttgttgctttaatggacatcctccgtgt
gggcagggctgtttggacgcaaggcactgtcattttgaagaggacacactgatattgtct
ttgaaatctgaagatggccagcttaggcatggtcctacagaaaatgagtatgtatataat
ggtcttcagagggtctcatgtttggatgcctcgggacaacctgaaagcaagcctgcatcc
tcttttgcagagcctctggaagtagaagaagatctcagtttcagccagtgctttacaggg
actgaagatatgctggatggagacggcagctgcgaatctgggattttatgcggaactggc
tatatttgtgcatcttcacaccattccacttactgtacctgtaaagagagtgcagaggat
gatcaaaaagctacaaccccctcacacttaagcctggagcagataaataatggctctcag
gttcatgagatgtccagaagagagtcacacagaaagtggaggaaacctctggattctaaa
attccattgtcttcggaagaacattttccacactgtccctgcagccacactagcttagag
aacagtgctgatacagacacatccttcgactgtaatgatgccaaacagcagaacacggag
gcaagtggcatctcaaacagttgcacgactgacgtcccatcaccatctggcaatgtgact
ggaaacagtaactctacatttatttccagtggacaagtaatgaattttaagggagatata
attgttgtctatgtcagtcaaaactcacaagaagcgccagctgcttctggaacatgtgat
ggaaatatgggaagtccggtgcaggaggaaaaccagtatcgctgcgatagctttgtagca
aacactcagctgcaccatacgaaatccagcgatacttatcaagcctgcacgacggaggga
aaagaactgaacagtgagaggaggagcctggggactgtgtttcaagaagaaacccgaggc
tgccaacactccgggtcatgtcatcgaaatgtagcgtcactacccattcaagaagaggga
aagtcggagcatttatccaaggaagcatggaaaggagagaacataagaacataa
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