Geotrypetes seraphini (Gaboon caecilian): 117357056
Help
Entry
117357056 CDS
T09159
Symbol
DSE
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
gsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117357056 (DSE)
Enzymes [BR:
gsh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
117357056 (DSE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4962
DUF6400
GoLoco
Motif
Other DBs
NCBI-GeneID:
117357056
NCBI-ProteinID:
XP_033793122
UniProt:
A0A6P8PYL8
LinkDB
All DBs
Position
3:complement(657451..901607)
Genome browser
AA seq
956 aa
AA seq
DB search
MRTYTRGAPTVFFLCLVCCIVSCKADKNPNPVIPFLNANYDSHPMLYFSNQDIEDLRLKA
ESTHQHITIRITQAAHTMLANPGEYLPPWDPEDFSARWNEIYGNNLGALAMFCILFPENT
KALDLAKEYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYSYLNKTQQEKFLEV
IANASGYMYETSFRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYFWTKQVLTIM
EKSLVILREVTDGSLYEGVAYGSYTSRSFFQYMFIVQRHFGINHFNHPWLKQHFAFLYRT
VLPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLAEQIQRNRIMDGPGTPAK
GQRWCTLHTEFLWYDASLRSVPPPDFGIPKLHYFEDWGVVTYGSALPAEVNRPFLSFKSG
KLGGRAIYDIVHRNKYKDWIKGWKNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFL
NNVLMFSPAVNAKSCFTPWEGQITEECSSKWLKYKRDPAASSHGQVTSALDKNGIVFIKG
EGAGAYNPELKLKSFQRNLILLHPQLLLLVDEIHLENDSPLEATTSFFHNVDTAFEEAVI
DSVHGACLRHKDGIYKMYWMDDTGYSQKAVISSVAYPRGYPYNGSNYVNVTTFLRKPVTR
AVYLFIGSSVEVESFSVRGDYQQVDIYLATSEHAYAVYLFTDTPRQSVFAQVVVDRQKIV
FEKVSFIKSTPMKEVKDYARTVEQNLLHFKPVFKQLEKQILSQVQNTDSFRKTAERLLRF
SDKRNTEEAIERIFAISQQHQSKTKRSRKGSKGYKFVDSIPDIFAQIEVNEKKTRQKVLA
LAQKELPVDEEEEMKDLLDFVEVPHINQRNSVLVKLGRYGPSQISTSRSRALSISASYTR
LFLVLNITIFVVLLVLQLTRFQKSKRLHGQRCLYSVLLVDSCILLWLYSSCSQSQC
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaggacttacacgcggggggcgcccactgtgtttttcttatgtttagtttgttgtatt
gtgtcctgtaaagcagacaaaaatccaaatcctgtaattccgttcctcaatgcaaattat
gacagccaccccatgctctacttttctaatcaagacatagaagatctacgactcaaggca
gagagcactcatcagcatattacgattcgcataactcaggctgctcacacaatgctggca
aatcctggtgaatatcttcctccttgggaccctgaggatttcagtgctcgttggaatgaa
atatatggcaataatctgggtgccctggcaatgttctgcatcctttttcctgagaacacc
aaagctctggacttggccaaggagtatatggaaaggatggcggctcagcctagttggtta
gtgaaagatgccccatgggatgaagtccctcttgcacactctctggttggttttgccact
gcttatgattttctatacagctatcttaacaagacccaacaggaaaaatttcttgaagta
atcgccaatgcatctggatatatgtatgaaacatcattcaggcgtggatggggtttccag
tacctgcacaatcatcagcctaccaactgcatggcccttttaacaggaagtttggttcta
atgaatcagggttatcttcaggaagcttatttctggactaagcaagttctcacaatcatg
gaaaagtctctagtcatactgagagaagtaacagatggatctctttatgaaggagtagcc
tatggcagctacactagcaggtctttctttcagtacatgttcattgtgcaaagacacttt
ggtatcaaccacttcaaccacccgtggcttaaacagcactttgcctttttatatagaacc
gttctgccaggtttccagagaactgtggcgattgctgactcaaactacaattggttctat
ggccctgaaagccaactggtgtttctggataagtttgtgatgcgcaatggcagcgggaac
tggctggcagaacagattcaaaggaatcgtataatggatggtccaggaactccagccaaa
gggcaacgctggtgcaccctacacactgaatttttgtggtatgatgcaagcttgcgttct
gtgccaccaccagattttggcattccaaaattacattactttgaggattggggagttgta
acctatggaagtgccttacctgctgaagtcaacaggccctttctttccttcaagtcagga
aaattgggagggcgtgcaatctatgatattgtccacaggaacaagtacaaagattggatc
aaaggatggaagaactttaatgctggtcatgagcacccagaccagaattcttttacgttt
gctccaaatggtgtgccattcataacagaagctttatatggacccaagtatacattctta
aacaatgtattaatgttttctcctgctgtgaatgctaagagttgttttactccctgggaa
gggcagattacagaggaatgttcatcaaagtggttaaaatacaaacgggacccagctgca
agttcccatgggcaggtaacgtcagctttggacaagaatggaattgttttcattaaggga
gaaggagcaggtgcctataatcctgaactaaagttaaaaagctttcaaaggaaccttata
cttctccatccacaactactacttttagtggatgaaatccatctagaaaatgatagccct
ttggaagcaacaaccagcttcttccataatgtggacacagcatttgaggaggcagttata
gacagtgtccatggcgcttgtctaagacacaaagatggaatatataaaatgtactggatg
gatgacactggctatagtcagaaggctgttatttcttcagttgcttatccacgaggctac
ccatacaacgggtctaattatgttaatgttacaacttttctcagaaaaccagtcacaaga
gctgtgtacctcttcattggatcttctgtggaagtggagagctttagtgtccgaggagat
taccaacaggtggatatatacttagctacaagtgagcatgcttacgcagtttatcttttc
actgatacccctcgtcagtcagtctttgcacaggtagttgtagaccgacaaaaaattgta
tttgagaaagtgtcgtttataaagagtactccaatgaaggaggtgaaggactatgccaga
actgtagaacagaacctcttacatttcaaaccagttttcaagcagcttgaaaagcaaatc
ttgtcccaggttcaaaacacggacagctttcgaaagactgcagagcgtttgctgagattt
tcagataagagaaatactgaggaggccattgaaaggatatttgccatctctcagcagcat
cagagcaagacaaaaaggagcagaaagggttccaaaggctacaagtttgtagattccatt
ccagatatttttgctcaaattgaagtaaatgaaaaaaaaacacgccaaaaagtgttagct
cttgcacagaaagagttgcccgtggatgaagaagaggagatgaaagaccttttagatttt
gtagaagtgccccatataaaccaaagaaatagtgttttggtaaaactaggcagatatggt
ccatcacagataagcacttctcgaagtagagcattatcaatatccgcatcttatactaga
ctcttcttagttttaaacattactatctttgtggtattgctggttttgcagctgactcga
tttcagaagtccaagagactacatggtcaaagatgcctttattcagttctcttagttgat
agctgtatattgttatggctgtattcctcttgttctcagtcacagtgttag
DBGET
integrated database retrieval system
