Geotrypetes seraphini (Gaboon caecilian): 117357400
Help
Entry
117357400 CDS
T09159
Symbol
NLRC4
Name
(RefSeq) NLR family CARD domain-containing protein 4 isoform X1
KO
K12805
NLR family CARD domain-containing protein 4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04621
NOD-like receptor signaling pathway
gsh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117357400 (NLRC4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117357400 (NLRC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gsh04054
]
117357400 (NLRC4)
Pattern recognition receptors [BR:
gsh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117357400 (NLRC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD
Nlrc4-like_WHD
CARD
LRR_8
NB-ARC
LRR_Zer-1
AAA_16
nSTAND3
AAA_22
LRR_4
AAA_30
IPK
ATPase_2
Motif
Other DBs
NCBI-GeneID:
117357400
NCBI-ProteinID:
XP_033793810
UniProt:
A0A6P8QD38
LinkDB
All DBs
Position
3:270123026..270327814
Genome browser
AA seq
1020 aa
AA seq
DB search
MMNFIKDAYVELVKRMGIPIVHQIVDDLFGKNVLSSEELNVIIQENVSQAASRKLIHMIL
NKGSESCNLFVNCLEKYDHWLFQDLCGRGQVQQKDLDMLVDVLVELYTLPLFQKFYPLGD
KIGIDILFDLGTTFTDPLLWKKDTYNRKRGLLTLESLLNDLENPCIIEGDAGKGKTTLLK
RIAMLWASGNCPALAKFRFVFFISLSSARGGIYETLIDQLLEDSFSWSKREFMQELHKLK
HTVLFLLDGYDEFEPKNCPEIEALIKENHKFRNSVILSTRKETIGNVRRFGKLIAETANL
TEDSAKLLIKNVLQEEAVDLLSQLEESSFMKNLMKTPLFVVIACAIRMGDSGLYLYTQTT
LFQALYDLMVRKNRHKIEDLTNECITKSINQCGDLALNGVFEHRFRFWEEDFTGMREEVL
LSAGLLQKNTAQRFRTDYSFFHTSFQEYTAGRRLADLLTSSEEEEVSRGMNYLRRMNSVS
EITTKYCNLLLYTCGSSVDATRIVVKHLTNVHDNDYLCASSPLNVNMLNEETESLLQVAN
MDSFVECGIGIFFESVSKSKLSDEFEKFFSSKSMYINTQNISTTLFEFFQHLPNCLSALN
LIKLDFFGSSLAPSGDVMEESGTEADPCKVQTYIPKKAVSLFFDWNQTLQNLEVRLKDFA
KLAKRDIKYLGKICCSAKRLRLLLKRSKGVAGNLAGILESCKNMQDLKVESTPLSPEDEQ
RIVAMTALKSLDIRDLQTERPQGLIDGMGSLINIEKLIFDSVKMNEDDTKKLAQGLKNLK
RLAILHLSHLTNIGNGMVDIVESICAEPRYLQEIKLVDCCLSGKAVKILAQNIKNFPKLR
MLDSSENNLKEEGKDSITMLVDSLNDFPDMMVLMLPWGCEVRLCLDTLLQHLIQIPQLVR
LGLKNWHLTDTEIAKLSAFFKEHLKGLQQLDLGGNCVTSDGWLSFTEALRGLKELTTLDL
SSEHSLELYSGLVLELSHVIFKLKGLQRVRLSGWQLDSIDLQKINSAKSGFEGEFQLLTA
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatttcatcaaggatgcctatgtagagctagttaaaagaatgggcatacccatt
gtacaccaaattgttgatgacctcttcggaaaaaatgttctatcaagtgaagaactgaat
gtaattattcaagaaaatgtaagccaagctgcttcaagaaaacttatacacatgattttg
aataaaggttcagaatcctgcaatctttttgtgaactgcctagagaaatatgaccattgg
ctttttcaggacctatgtggcagagggcaagtgcaacaaaaggaccttgatatgttagtt
gacgtcttggtggagctctacacattaccactgtttcagaaattttatccactgggtgac
aaaattggcattgacatactttttgacttaggaaccacttttacagatcctttgctctgg
aagaaagatacatacaatcgcaagagggggctgctcactttggagtccctcttgaatgat
ttagaaaacccatgcatcatcgaaggagatgctggcaaaggaaaaacaactcttctcaag
agaatagcaatgctctgggcctctggaaattgccctgctttagctaagttcagatttgtc
ttctttataagtctgagcagtgcaagaggtggaatatatgaaactctgattgaccagcta
ttggaggattcattttcatggagcaaaagagagttcatgcaagagttacataagctaaag
catacagtgcttttccttttggatgggtatgatgagtttgagcccaagaattgccctgaa
atagaagcattgattaaagaaaaccataagttcagaaattcagttattttaagcaccagg
aaggaaactattggaaatgtacgacggtttgggaaactaattgctgaaacagccaattta
acagaagacagtgctaagctgctcattaaaaatgtcttgcaagaagaggctgtagatttg
ttgtctcagctggaagaatccagtttcatgaagaatcttatgaagactccactatttgtg
gtgattgcttgtgccattcgaatgggtgacagtggcctctacctatacacacagactaca
ctgtttcaggcactatatgacctgatggttagaaaaaacaggcacaaaattgaagatcta
acaaatgaatgcataactaagagcataaatcagtgtggagacctggcacttaatggagtg
tttgaacacagattcaggttctgggaagaagactttactggcatgagagaagaggttcta
ctgtctgcaggtctgttacagaaaaatactgctcagcggtttagaactgactacagtttt
tttcacacgtcatttcaggagtatacagcaggtaggagacttgctgatttactgacatct
agtgaagaagaagaggtgtccagaggcatgaattatctgagaagaatgaattctgtttct
gagattaccaccaagtactgcaatctgctcctgtatacttgtggatcctctgtagatgcc
actagaatagttgtgaagcacttgacaaacgttcatgataatgattacctttgtgcttca
tctcctctaaatgttaacatgctgaatgaagaaacggagagtcttcttcaggtagctaat
atggattcctttgtagaatgtggtataggtatcttttttgaaagtgtttccaaatctaaa
ctgagtgatgaatttgaaaagttcttttcctctaaaagcatgtacataaacacccagaat
atatccacaacactctttgaattttttcaacatttacctaattgtctttcggcactgaac
cttattaaattagatttctttggaagttctcttgctccctcaggtgatgttatggaagaa
agtggtacagaagcagacccttgcaaagtccagacgtacatacctaaaaaagcagtgtct
ttattttttgattggaaccagacgctccaaaatttagaagttaggctgaaggactttgcc
aagcttgctaaaagagacataaaatatcttgggaaaatatgctgctctgccaaaaggctc
aggttgctcctcaaaagaagtaaaggtgtcgctgggaatttggcaggaattcttgagtcc
tgcaagaacatgcaagaccttaaggttgaaagcacaccactgagcccagaagatgaacaa
aggattgtagcaatgacagcgctgaaatcattagatattagagatctacaaactgaacgg
ccacaaggtcttattgatgggatgggtagcttgatcaatattgagaagctgatctttgac
agtgtaaagatgaatgaagatgataccaaaaaattagctcagggtctgaagaatttgaag
aggttggctatattgcacttatctcatctgaccaatattggaaatggaatggttgatata
gtagaatccatatgtgctgagcccaggtatcttcaagaaataaaactagttgactgttgc
ctatctgggaaagcagtgaaaatacttgcacagaatattaagaatttcccaaagctgaga
atgcttgattcctctgaaaataatttaaaggaagaaggcaaagattctattactatgtta
gttgatagcctgaatgactttccagacatgatggtgctgatgctaccttggggatgtgag
gtcaggctgtgcctagacactttattacaacacctaatacagattcctcagctggtcaga
ctgggactgaagaattggcacctgacagatacagagattgcaaaactctctgcttttttc
aaggagcacttgaaaggcctgcagcagctggacctaggtggaaactgtgtgaccagcgat
ggctggctgtccttcactgaagcactgaggggcctgaaggaactaaccacacttgacctc
agtagtgagcacagtcttgagctctactcaggcctcgttctggaacttagtcatgttata
ttcaagctgaagggccttcagagagtcaggctcagtggctggcagctagacagcattgac
ctgcagaaaattaatagtgcaaaatctggcttcgaaggtgaattccagttactgactgcc
tga
DBGET
integrated database retrieval system
