Geotrypetes seraphini (Gaboon caecilian): 117357473
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Entry
117357473 CDS
T09159
Symbol
SP1
Name
(RefSeq) transcription factor Sp1 isoform X1
KO
K04684
transcription factor Sp1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04137
Mitophagy - animal
gsh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117357473 (SP1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117357473 (SP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117357473 (SP1)
03029 Mitochondrial biogenesis [BR:
gsh03029
]
117357473 (SP1)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
117357473 (SP1)
Mitochondrial biogenesis [BR:
gsh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
117357473 (SP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
zf-C2H2_8
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
117357473
NCBI-ProteinID:
XP_033794024
UniProt:
A0A6P8QCD9
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Position
3:184860453..184915964
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AA seq
738 aa
AA seq
DB search
MCFYFSDQDHPEEMSAAKLRSSGQGQDSQPSPLALLAATCSRIEPPENASNSQGQGSAEL
DLSNAQIAQAANGWQVLAASVGATATSKEQSIGDSTSSKTRSTAGQYVVATAPSVQNQQV
LASLPGVMPNIQYQVIPQFQTMDGQQLQFTTAPTQVNVQQDASGQFQIIPGTNQQIITTN
RAGTGNIIAAMPNLLQQAVPIQGVGIANNMLSGQTPYLANVPVALNGNITLLPVNSVAAT
LAPSSHAVTLSSTSNSQDNSSQPVTSGTVVSSAPLSTSSANSGTFFTNANSFSTTTTTSN
MGVMNFSAAGTMGTNIQAQTPQRSGGLQTSSSDTIQLQQSGMATQKDGDQNQQQQQILIQ
PQIVQGGQAIQTLQAAPLSSQFTTQAISQDALQNLQIQAVPNSGPIIIRTPTVGPNGQVS
WQTIQLQNLQVQNPQAQTITLTPMQGVSLGQTGNSTTLTSVPTGTVTLNAAQLSSMPGLQ
TINLGALGASGIQVHQLQGVPLTIANTSGDHNSQISLQGTGGDVMHEDSGTLEEGEISPE
PQRQQGRRVRREACTCPYCKDNEGRGSGDPGKKKQHICHVTGCGKVYGKTSHLRAHLRWH
TGERPFVCNWVYCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQN
KKGNPSTTVTMTTVPIDTGAGSDGSTTSTPTPQALITATGMVAMEALSPEGIARLANSGI
NVMQVADLQSINISGNGF
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttttacttttcagatcaggatcatccagaagaaatgtcggcggcgaagcttcgg
agctccggtcagggccaggactcccagccgtcccccttggctctgttggcagctacttgc
agtaggattgaaccacccgagaatgccagtaattcccaaggacaaggctcagcagaactg
gatttgtccaatgctcagattgcccaggcggccaatggctggcaggttctagcagcatct
gttggagccactgctacttccaaggagcagagtattggagattcaacatcttcaaagact
cggtccacagctggtcagtatgtggttgccacagctcccagtgtacagaaccagcaggtc
ctggcaagtctgccaggagttatgccaaatattcagtaccaggtgatcccacagtttcaa
actatggatgggcagcagttgcagtttaccacagcaccaactcaagttaatgtccagcag
gatgcatcaggacaatttcagatcatccctgggacaaaccaacagattataaccaccaac
agagcgggtacaggaaatattatagcagctatgccaaacttactccagcaagctgtccca
atccagggagttggcattgccaataatatgctttctggccagactccttatctggcaaat
gtcccagtggccttaaatggcaatattacactgctgcccgtaaacagtgttgcagcaaca
ttggcacctagttctcatgcagttactttaagtagcaccagcaactcccaagacaacagc
tcccaacctgtgacctctggcacagtagtgagctctgccccattgtcaacatctagtgcc
aactccggtacttttttcacaaatgccaatagtttctcaactaccaccaccaccagcaat
atgggtgttatgaatttttcagctgctggtacaatgggaacaaatattcaagctcagacc
cctcagagatctggtggacttcagacatcaagcagcgacactatacagctccagcagagc
ggcatggcaacacagaaagatggagatcaaaatcagcagcagcaacagatccttatacag
cctcagattgtgcaaggggggcaagccatccaaacactgcaagcagctccattatcaagt
cagtttactactcaagccatttcacaggatgcccttcaaaacctacaaattcaagcggtc
cctaattctggtccaattatcataaggacaccaacagtggggcccaatgggcaggtaagc
tggcaaactatccagctacagaatctccaggttcagaatcctcaagctcagacaatcacc
ttgaccccaatgcaaggagtgtctttgggtcagacagggaacagcacaactctcacatca
gtgcccacaggaactgtcacattaaatgcagctcagctgtcctctatgccaggtcttcag
actatcaacctcggtgccctgggagcatcaggaattcaagttcatcagttacagggagtt
ccactcaccatagctaatactagtggggaccacaattctcagattagcctccaagggaca
ggaggcgatgtgatgcatgaagacagtggtactctggaagaaggagagatcagcccagaa
ccacagcgacagcagggtcggagagtgcggagggaagcctgtacctgcccctactgcaaa
gacaatgaagggaggggctctggggatcctgggaaaaagaagcaacatatctgccatgtt
acaggctgtggcaaggtatatgggaagacctcccatctgcgagcccacctccgctggcac
acaggcgagagacccttcgtgtgcaactgggtatactgcgggaagcgcttcacacgaagt
gatgagctgcagcgacataagcgtacccacactggtgagaagaagtttgcttgcccagag
tgccccaaacgcttcatgaggagtgaccacctgtccaagcacatcaagactcaccaaaac
aagaagggaaatcccagcaccactgtgaccatgactacagtccctatcgacactggggct
ggctcggatggcagcacaacctctacaccaacaccgcaagctctcatcacagctactggc
atggtcgcaatggaggccttatccccagagggtattgcacgcctggccaacagtggtatc
aatgtcatgcaggtggcagatctccagtctatcaacatcagtggcaatgggttctga
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