Geotrypetes seraphini (Gaboon caecilian): 117357744
Help
Entry
117357744 CDS
T09159
Symbol
WDPCP
Name
(RefSeq) WD repeat-containing and planar cell polarity effector protein fritz homolog isoform X1
KO
K22863
WD repeat-containing and planar cell polarity effector protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gsh03037
]
117357744 (WDPCP)
Cilium and associated proteins [BR:
gsh03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
117357744 (WDPCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frtz
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Terminase_6
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
117357744
NCBI-ProteinID:
XP_033794673
UniProt:
A0A6P8R3V0
LinkDB
All DBs
Position
3:complement(339029805..339512816)
Genome browser
AA seq
734 aa
AA seq
DB search
MEKAWEPANCISFCHQMSFCLTELHLWSLKNTLHVGDEDIGTYQYYDKKELASQTNYGYL
EEKRQLAESRDYPWILKNRRPEKLRDTLSELEELMQNSECVLSKWKNKYVCQLLYGSGVL
VSLSLSGPHLEKVVIDKTLMGKLISDSISDAALMDSFIILSFWDKNKLCYIQFTKADSPD
TNKRLEKLSSLDFKISHVDLPGPAGRQMRRRLAVNCMQDMVICWWLRANDDAWPWSPIST
EREKANLVLLSCANSRLEVLSYIRTEWDPLDASFSINQPYQVHTVEQSISADKEPMADSC
IYECARSKIQCVAVTRIPLRSNIISCCRNSKEDKLVLGCEDSSVILYEGHHKMTLLAQAE
LLPTLIQWHPSGSLFLVGSSQGELQIFDMALSPVKVQLLAEDCSPVSTLQFCKHFDVSSS
MVQMQWTVPQGVPQNADSSDIYNLLFLRFDKGPIGVLLFKFGAITRGQLGPVEIIHQYIR
YDEINEAISVLSSMDWNMMGHRCYIGLSAIVNHLLKQKLTAEREAQLEASLGTFYAPVRL
LSDTTVLEYRDPISRYARRFFHHLLRYQRFEKAFLLAVDIGARDLFMDIHYIALDKSELA
LAEVAKRKANEIDAESITTGVELLESLDQVDTLSEAFVDLSMTPHGEESFLDGSHPSGLN
GRCFSQCAAHDSSFNRPSNHRQTSDLERELGINIYASPLMDKTLPWNQEGNLEEDGEQDS
GGNGSLKVIHFGLV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcctgggagccggcgaactgcatttccttctgccatcagatgtctttctgc
ctgacagagttgcacctgtggtctttgaagaatactttacatgttggggatgaagatatt
ggaacttatcaatattatgacaagaaagagctagcatctcaaacaaattatggttactta
gaagagaaacggcaactggcagaatcacgagattatccctggattctcaagaacagacgt
ccagaaaagcttcgagacacactcagcgagctggaggagctgatgcaaaacagcgagtgt
gtgctgagcaaatggaagaacaaatatgtctgtcagctcctctatggttcaggtgtactc
gtgtctttaagcctttctgggcctcatctggagaaagtggtgattgacaagactctgatg
ggaaagctcatttctgacagcatcagcgatgctgcactaatggacagtttcatcatcctg
tcattttgggataaaaacaaactttgttatatccagtttacaaaggcagattctcccgat
accaacaaaagactggaaaaactgtcgtccttggattttaagatttcacatgttgatcta
cctggacctgcaggccgacagatgaggcgacgccttgctgtaaattgtatgcaggacatg
gtgatatgctggtggctgagagctaatgatgatgcctggccatggtctcccatttcaacc
gaaagagaaaaggccaacctagtattattaagctgcgctaacagcagattggaggttttg
agttatatccggacagaatgggatccacttgatgctagctttagcattaatcagccttat
caggttcacacagtagaacagtccatcagtgcagacaaagagcccatggctgacagctgt
atctatgaatgtgctcggagcaagattcagtgtgtggcagttaccagaataccactcagg
tcaaacattattagctgctgcaggaacagtaaagaagacaagctggtcctgggctgtgag
gattcttcagtcattctctatgaaggacaccataaaatgacattgctggcccaggcagaa
ctattgcctacattaatacaatggcatcctagtggatctttatttctggtcggtagtagt
caaggtgagctgcagatttttgacatggcactgtcaccagttaaagtccagcttttggca
gaagattgttcaccagtgtcaacattacagttctgcaaacattttgatgtatctagcagt
atggtccaaatgcaatggactgttccacaaggagttccccaaaatgcagacagttcagat
atttataacctcctgtttcttaggtttgacaaagggcctataggagttcttctgtttaaa
tttggtgccataacaagaggacaactgggccctgttgagatcatacaccagtatattcgc
tatgatgagatcaatgaggcgattagtgtcctgagcagcatggactggaacatgatgggt
catcggtgttacataggcctgagtgccattgtcaatcaccttcttaaacaaaagctaaca
gcagagagagaagcccagctggaggcaagccttggaaccttttatgctcctgtaagactg
ctttctgatactactgtgttggaatatagagatccaatcagccgatatgcaagacgattc
ttccaccacctgctcagatatcagagatttgaaaaggcctttctgctggctgtggatata
ggtgcccgtgacctctttatggacatccattacattgcactagataagagtgaattggca
ctggctgaagtggcaaagagaaaagctaacgaaatagatgcagaatcaataactactgga
gttgagctcttggagtccttggaccaagtggatactttaagtgaagcttttgttgatctg
tccatgacacctcatggggaagaatccttcttggacggcagccatccctctggcttaaat
ggtagatgcttctcccaatgcgcagctcatgacagttcgtttaatagaccttcaaaccac
agacaaacatctgatctggagcgtgagcttggaattaacatctatgcttcacctttgatg
gataagacattgccctggaatcaggaagggaacctcgaagaagatggagaacaggactct
ggaggaaatggatctcttaaggtgattcactttggtttagtgtga
DBGET
integrated database retrieval system
