Geotrypetes seraphini (Gaboon caecilian): 117359077
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Entry
117359077 CDS
T09159
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein isoform X1
KO
K06838
slit 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gsh00536
]
117359077 (SLIT1)
Glycosaminoglycan binding proteins [BR:
gsh00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117359077 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
LRRNT
Laminin_G_2
Laminin_G_1
LRRCT
hEGF
EGF_TEN
LRR_1
LRR_14
LRR_9
LRR_EndoS
EGF_Teneurin
EGF_MSP1_1
EGF_DL_JAG
EGF_CA
Laminin_G_3
EGF_3
Motif
Other DBs
NCBI-GeneID:
117359077
NCBI-ProteinID:
XP_033797142
UniProt:
A0A6P8QD69
LinkDB
All DBs
Position
4:284938343..285545099
Genome browser
AA seq
1527 aa
AA seq
DB search
MAGEGLGLRAGVWLLVWSALWRDPAAAACPTLCTCSGTTVDCHGLGLRTVPKNIPRSAER
LELYGNNITRVNKNDLSGLKQMRVLQLMENQINTVERGVFDDMKDLERLRLNRNHLHTLP
ELLFQNNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEV
LTLNNNNITTVPVSSFNHMPKLRTFRLHSNNLFCDCHISWLSQWLRQRPTIGLFTQCAGP
QQLHGINVAEIQKHEFSCSGQMDSLNTQLCSLSIGSCPAMCTCSNGIVDCRGKGLTAIPA
NLPETMTEIRLELNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLY
GNKITSLPKGVFSGLYALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTF
TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKF
RCSAKEQYSIPGTEDYQLNSDCNNDVVCPPKCRCESNVVECSNLKLTKIPDRIPQSTAEL
RLNNNEMSVLEATGLFRKLPHLKKINLSNNKITEIEDGAFEGASSVSELHLTANHLESVR
SGMFRGLGGLRTLMLRNNRINCVHNDSFTGLRNVRLLSLYDNQISVISPGAFDTLQSLST
LNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEEGGQL
DLSCVPRPQCPQECTCLDTVVRCSNKHLVSLPKGIPKNVTELYLDGNHFTLVPGQLSTFK
YLQLVDLSNNKISSLSNSSFMNMSQLTTLILSYNSLRCIPSLAFEGLRSLRLLSLHGNDI
SSLPEGIFTDVISLSHLAIGANPLYCDCNLRWLSGWVKTGYKEPGIARCAGPSDMDGKLL
LTTPAKKFECQGPPSLSVQAKCNPCLSSPCRNQAICRNDPVEFYKCICPESYKGRDCEIP
VNACASNPCENGGMCHAEPESGFMCSCAEGFEGPTCVINKDDCEDSDCENGGTCIDGVNN
YTCICTPYYIGEHCKQIIDFCSMERNPCQHNSKCVVTAEGPKCECPPGYMGDNCSFNIDD
CRDHQCQHNSQCVDEVNGYSCLCTEGYSGQLCEIPSRTLALPSPCELAECQNGANCIDLG
NRAICQCLPGFGGSKCEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGILLYN
GDNDHMAVELYQGHVRVSYDPGSFPNSAIYSAETINDGQFHTVELVTFDQMVNLSIDGGA
PLTMDNFGKQYTLNEAPLYVGGMPVDVNSAAFRVWQILNGTSFHGCIRNLYINNELQDFT
KTQMKPGVVPGCEPCRKLFCLHGICQPNTAHGPVCHCELGWEGPHCDQPISNPCQGHKCI
HGTCMPVDSLSYSCQCQDGYKGALCNEQGELYNPCKNLQCQQGRCQISDLGEAYCECNSG
FTGDLCDQESECRGDPVRDYHQVQKGYAICQTTRTVSWVECRGSCQSQGCCTGLRMKRRK
YTFECSDGSSFVEEVEKAIKCGCAQCM
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgaggggctggggctgagggcaggggtctggctcctggtgtggagcgcgctc
tggcgggaccccgccgccgccgcctgccccactctgtgtacctgcagcggaaccaccgtg
gattgccacggcttagggctgaggacggtgcccaagaacatcccgaggagcgcggagaga
ctggagctctatgggaataacatcactcgtgtcaacaaaaacgacctctctggactcaaa
cagatgcgcgttttgcaactgatggaaaaccagattaacacagtcgagcgaggtgttttc
gatgacatgaaggatctcgaaagactacggctgaatcggaaccatctgcacacgttgcct
gagcttctcttccagaacaatcaggctctctccagactggaccttagcgagaacttcatc
caggcaatcccaagaaaagctttccggggtgctaccgatctcaaaaacctgcaactggac
aagaatcagatcagctgtattgaagatggagcctttcgtgctcttagaggcttagaggtg
ctaactctcaacaacaacaatatcaccacggttcccgtctcaagcttcaaccacatgccc
aaactccgcactttccgtttgcattccaacaatctgttctgcgattgccacatatcctgg
ctttctcagtggcttcgccagcggccaactattggactcttcacgcagtgcgctgggcca
cagcagctgcatggcatcaatgtggcagagattcagaagcacgagtttagctgctcaggt
caaatggattcccttaatacccagctctgtagcctctccatcggctcttgccctgccatg
tgcacctgcagtaatggcatcgtggactgccgaggcaaaggactgaccgccatcccagca
aacttaccagagaccatgactgagatacgcctggaactcaatggaatcaaatcaattcca
ccaggcgccttctcaccctataagaagctacgcagaattgacttgagcaacaaccagatc
tcagagattgcacctgatgcgttccagggtctccgctccttaaactcgctggtcttatat
gggaacaagatcaccagtttacccaaaggagtgtttagtgggctttatgcactgcagctg
ttacttctgaatgctaacaaaataaactgtgtgcgggctgatgctttccaggacctgcag
aacttgtctctgctctccctgtatgacaacaagatccagagcctggcaaaaggaacattt
acttccctccgagccatccagaccttgcatttagctcagaatccgttcatctgcgactgt
aacctgaagtggctggcggacttcctgcgaaccaacccgattgagaccagtggagcgcgt
tgtgccagcccacgccgcctcgccaacaaacgcattggccagattaaaagtaaaaaattc
cggtgttcagctaaagaacagtattctattccagggacggaggattaccagctaaacagt
gattgtaacaacgatgtggtgtgtccaccaaagtgccgttgtgagtccaatgtggtagaa
tgctccaacctgaaacttaccaagattccagatcgcatcccacagtctactgcagaacta
cgcttaaacaataacgaaatgtcagtgttggaggctaccggtctcttcaggaagctgcca
cacctgaagaaaatcaacttaagcaacaataagatcactgagattgaagatggagcattt
gagggagcatcatctgtgagtgagctacacttgacagccaatcacctggaatcagtacga
agtggaatgttccgaggtctgggaggactgagaaccctgatgctgcggaataatcggatc
aactgtgtgcacaatgacagcttcacagggctgagaaatgtccggctgctctcactgtat
gataaccagattagtgtcatctccccaggagcatttgacaccctgcagtctctctcaact
ctgaacctgttggccaacccattcaattgtaactgccagcttgcctggttgggagactgg
ctaaggaagaggaagattgtgactggaaaccctcgctgccaaaacccagacttcctaaga
caaatccccctacaagatgttgccttccccgacttcaggtgtgaggaaggaggtcagttg
gatttgagttgtgtcccacgacctcagtgcccccaagagtgtacctgtttggacacggtc
gttcgttgcagcaacaagcacttggtatcgctccccaaagggatcccaaagaatgtcaca
gagctttatctggatggtaatcacttcaccctggtacctggacagctgtcaaccttcaag
tacctacagctggtagacttaagcaacaacaagatcagttccttgagcaattcgtctttc
atgaacatgagccagctgactacactgatcctcagttacaactctctgaggtgtatccca
tcactggcttttgaaggtctccgttctttgcgattactgtcgctccatggcaatgatatc
tcaagccttccagaaggaatcttcacagatgttatctctctctctcacctggcgattggc
gccaaccctctgtactgtgactgtaacttgcgctggctttcaggatgggtcaaaacaggg
tacaaggaacctggcattgcccgctgtgctgggcccagtgacatggacggaaagctgctt
cttaccacacctgccaagaagtttgaatgccaaggtcctccaagcttgagtgttcaggca
aagtgtaatccctgcttgtcgagcccatgtcggaatcaagccatctgtcgaaatgaccca
gtcgagttttataaatgtatctgcccagaaagctacaagggcagagactgtgaaattccc
gtcaatgcctgcgccagtaatccctgtgaaaacggtggaatgtgccatgctgagccagag
tctggattcatgtgttcctgtgctgagggatttgagggtccgacatgtgtgattaataaa
gatgactgtgaagacagtgactgtgagaatggaggcacctgtatagatggggtcaataat
tacacatgcatatgtacaccttattacataggagaacattgtaagcaaattattgatttc
tgttccatggagaggaatccctgccagcacaattccaagtgtgtggttactgctgaaggg
ccaaagtgtgagtgtcccccgggctacatgggagataattgcagtttcaatatagatgac
tgcagagaccatcaatgccagcataacagtcagtgtgtggatgaggtgaatggatattcc
tgcctttgtacagaaggatacagtggtcaactgtgtgaaataccatcacgaaccttagcc
ttgccaagcccctgtgaattggcagaatgtcaaaacggtgctaattgtattgacctgggg
aaccgtgctatatgtcagtgccttccaggatttggtggatctaaatgtgaaaagcttctg
agtgtcaactttgtggatcgggatacatacctgcagtttacagatttacagaactggccc
agagcaaatattacattacaggtatcaacagcagaagataatggaatcctgctttacaat
ggagacaatgaccatatggctgtggaattgtaccaggggcatgtacgagtcagttatgac
ccaggcagcttccccaattctgccatctacagtgcagagacaatcaatgatggacaattc
catacagtggaactggtcacttttgatcaaatggtgaatctttctattgatggaggtgcc
cccttgaccatggataattttggcaaacaatataccctaaatgaagccccgctgtatgtt
ggaggtatgcctgtagatgtgaactcagctgcatttcgagtttggcaaattctcaatggt
accagtttccatggctgtatccgcaacttgtatataaataatgagctacaggacttcact
aagacccagatgaaacctggagttgttccaggctgtgagccatgccgcaaactattctgc
ctgcatggcatctgtcagcctaacactgcccatggccctgtctgccactgtgagctaggt
tgggaagggcctcattgtgaccagccaataagcaacccatgccaagggcacaaatgtatc
catgggacatgcatgccagttgactccttgtcctatagctgccagtgccaggatgggtac
aaaggagccttgtgtaatgaacagggagagctctacaatccttgcaagaacttgcagtgc
cagcaaggacgctgccagatctcagacttaggcgaggcctattgtgagtgcaacagtggt
ttcacaggcgacctctgtgatcaagagtctgagtgtcgtggagatccagtcagagactac
catcaagttcagaagggctatgccatctgtcaaaccactcgcactgtctcttgggtagaa
tgtcgggggtcctgccaaagccagggctgctgcacaggattacgcatgaaacgcaggaag
tacacattcgaatgcagtgatgggtcttcttttgtcgaggaagtagagaaagccatcaag
tgtggatgcgctcagtgcatgtaa
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integrated database retrieval system
