Geotrypetes seraphini (Gaboon caecilian): 117360676
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Entry
117360676 CDS
T09159
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04010
MAPK signaling pathway
gsh04020
Calcium signaling pathway
gsh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117360676
04020 Calcium signaling pathway
117360676
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117360676
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gsh01001
]
117360676
Enzymes [BR:
gsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117360676
Protein kinases [BR:
gsh01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
117360676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
ig
VEGFR-1-like_Ig-like
VEGFR-2_TMD
VEGFR1-3_N_Ig-like
V-set
Ig_VEGFR-1-like_5th
Ig_4
Izumo-Ig
C1-set
C2-set_2
Adeno_E3_CR1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
117360676
NCBI-ProteinID:
XP_033800738
UniProt:
A0A6P8RDP1
LinkDB
All DBs
Position
5:13439131..13772872
Genome browser
AA seq
1331 aa
AA seq
DB search
MIPARALGVLLLLRLPWVQGSLPQKTLTKPELSPPDEQIVKEAGQSFSITCRGSASLTWL
WNNILYSVNNSLLVSESRCSEADGTICSQLTITKALASHTGYVSCGYSNLPFHKDLTAEL
YLFVKDNANPFVMKNVDTPAVINMTSEDELIIPCRVTSPDFNVTLKMSPDSEYSPPGMVW
DPRKGFIIPSPSYHLQRVLKCVTHVNGEDHVSFHVPQKLVIPRILKVIASQDRVVVGDSL
NITCLLQTTFNGRPNVELMHNGKNRSAPYIKKRMLLEGPLYTYFTTLVIPNVTMEDRGVY
SCKDLSQKLQEKSIAITVYRNGVLKILSNRSLIYEVNEGHKRLKMTVKVAALPHADVTWY
KDGELIGPMHCCYKSDPDKYRLYIKKVTEKDAGNYILVLRNPRHGLYENVTFTLEVNTKP
TIYEKEIDFDKIEPILVGSEQTLQCTTSGKPPPTIHWEWQPCFTTLSSTVCHIESPEHRI
PVALSNKSDLVGTNRILSIEEVVTVHEGKIKVLGILKAIAGTNGSGIFFCVPQNKVGRAE
RSIRFYVSDMHTGVSTIENIHVLTGSDVNLTCKAENYLYDKLTWYYPSSEEAPAALTVSE
KKGHALSLSLTLTNVSLADAGLYRCKAKNRNNPREMIDRFTNVAVQEKRAPYIVQELEEV
EVNSSNTLHLECLVDGVPIPTITWLKNGYEMKPASGISLLVNNSLIIERVKKDDEGLYEC
KASNEMGEARTGAFITIQASEEKANIEVIILVCTGVAATLFWLLLTLFIRKLKKPTATDI
KTSYLSIIMDPDEIPLDEQCERLPYDSSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGID
KCSTCKTVAVKMLKECATTNECKALMSELKILIHIGHHLNVVNLLGACTKTGGPLMVIVE
YCKFGNLSNYLRSKRGDFIACKSQENSDPTEKVLDDSNNDLTELIKPRLQSVASTGSSAS
SGFIEDKSYSDSEEEGEDAEELRKRPLTMEDLICYSFQVAKGMEFLASRKCIHRDLAARN
ILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKTYTTQSDVWSFGV
LLWEIFSLGASPYPGVHIDEDFCLRLKEGTRMRPPEYTTPEMYQTMLDCWHGVPTERPNF
TDLVERLGDLLQANVQQEGKDYIPLNTALSPDGDANSTQGGTEESLKNSIVRWSRWSLLE
IGNKIKMRPLSVKTFDEVPVGKEEALHEESESDSGMVLSSEEMKSLKRQETRSWPFGIMA
FKKTAVSKNKESVLTEIRREMIKYQPAAQTEDDTLDCTLEDFVLLPMDLSLECHSPPPDY
NSVVHYSTPPV
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgcacgcgcgctgggcgtgcttcttctcctcaggttaccctgggtgcaaggt
tctcttcctcagaaaacactaacgaagcctgaactgagccctccagatgagcaaatagtg
aaagaagccgggcagtccttctccatcacatgcaggggatcggcctccttgacctggctt
tggaataacatcctatactctgtcaataacagtctcctggtgagtgagagccgatgttcg
gaggccgatggaaccatctgcagtcagttgaccattacaaaggccctggccagtcacact
ggatacgtttcctgtggttacagcaaccttccattccacaaagacctgacagctgagctg
tacttgtttgtcaaagacaatgcaaatccctttgtaatgaagaatgtcgatactcccgcc
gtgatcaatatgaccagtgaggatgaacttatcattccctgccgtgtcacatccccagat
tttaatgtcaccttgaaaatgagcccggattcagagtacagcccccctggaatggtgtgg
gatccacggaaaggtttcatcataccctccccttcttaccacctacagagggttctgaaa
tgtgtcacccatgtgaatggagaggatcacgtgtctttccacgtgccacaaaaattagta
attccaagaatccttaaagtgattgccagccaggatagggttgtggttggagacagcctg
aacatcacgtgccttctgcagaccactttcaatggtcgacctaatgtggaattgatgcac
aatggaaagaaccgctcagctccttatattaagaaaagaatgcttctagagggccccctg
tatacgtacttcacgactttggtcataccgaatgttacgatggaagatcgaggtgtctac
tcatgcaaagacctgagccagaagctgcaggaaaagagcatcgcaatcacagtgtaccga
aatggtgtcctcaagattttgtccaacaggagtttgatatatgaagtcaatgaaggccac
aagcgactgaaaatgactgtgaaagtggcagctttaccgcacgccgatgtcacctggtac
aaagatggcgagctaatcggaccgatgcattgttgttacaaatcagatcccgataaatac
agattgtacataaaaaaagtgacagaaaaggatgctgggaattacattttggttctaaga
aatccccgccatggcctgtatgaaaatgtcacctttaccctggaagtgaacaccaagcct
acaatctatgaaaaggagattgattttgataaaatcgagccaatcctggtgggaagtgag
caaacgcttcagtgcaccacatctggaaagcctcctcccacaatccactgggagtggcag
ccatgttttaccacactttccagtacagtgtgtcatatagagtctccagagcaccgaatc
ccagtggctttaagcaacaagagtgacctggtcgggaccaacaggattttgagtattgaa
gaggtcgtcacagtgcacgaggggaaaataaaggtcttgggcatcctgaaagcaatagca
gggaccaatggatcgggaatctttttctgcgtaccgcagaacaaagttggaagagctgag
agaagcatcaggttctatgtatcagatatgcacaccggtgtttcgaccatcgaaaacatt
catgtgctcacggggagtgatgtcaacctcacgtgcaaagctgagaattacctttatgac
aagctcacctggtactacccttcctcagaagaagcacctgccgccctgactgtcagtgaa
aagaaaggccacgccctttccttgtcactgactctaacaaacgtgtcactggccgatgct
ggcctgtacaggtgcaaggctaagaatcgcaataatcccagagaaatgattgatcgcttc
accaacgttgctgtccaagaaaagagagctccatacatagtgcaggagctcgaagaagtg
gaggtgaacagcagcaacacactccacctggaatgcttagtggatggggtgcccattccc
accatcacctggctaaaaaatggttatgaaatgaaaccagcctcaggaatttctctgctg
gtcaacaacagcctaatcatagaacgggtgaaaaaggatgacgagggcttgtatgaatgt
aaggcctcgaacgagatgggggaagcgagaacaggagcgttcattacaatacaagcctcg
gaggaaaaagcaaatatcgaagtcattatccttgtctgcacgggagtagcggcgacgctc
ttttggctgcttcttaccttgttcatccgaaaactgaaaaaacctactgctacagatatt
aaaacaagctacctgtcaatcatcatggatccagatgagatacctctggatgaacagtgc
gagcggctcccttatgacagcagtaagtgggagttccctcgtgacaggcttcgattgggt
aagaccctgggtcatggtgcgtttgggaaggtggtggaagcgtctgcttttggcattgat
aaatgttcaacttgtaagacggttgcagtaaagatgctcaaagagtgcgcaaccaccaat
gaatgcaaggcgttaatgtcagaactgaaaatccttatccacatcggtcaccatctgaac
gtggtcaacttgcttggagcctgcaccaagacaggaggtcctttgatggtcatagtagaa
tactgcaagttcggaaacctttcaaattatttgaggagcaagagaggcgatttcattgcc
tgcaagtcgcaagaaaactctgacccaacagagaaagtgctggatgactccaacaatgac
ctaactgagcttataaagccacggctgcagagcgtagcgagcacgggcagctctgccagt
tcgggattcattgaggacaagagctacagtgactcagaggaggaaggagaagatgctgag
gaactgcgcaagcgaccattaacgatggaagatctgatttgctacagtttccaggtggca
aagggcatggagttcctggcttccagaaagtgtattcaccgtgatttggcagccaggaac
atcctactgtctgaaaataatgtggtgaagatctgtgactttggactggcccgggatatt
tacaaagatcctgattacgtgcggaaaggcgatgcaaggcttccgcttaaatggatggca
cccgaagctatttttgacaaaacatacacaacacagagcgatgtctggtcttttggggtg
ctgttgtgggaaatcttttctcttggtgcctcaccttatccaggagtgcatatagatgag
gacttttgccttcgacttaaagaaggaacccgaatgagacctccagagtacaccactcct
gaaatgtaccagacaatgctggattgctggcatggagttccaacagaacgaccaaacttc
accgatctggtggaacgattaggagacctcctccaggcaaatgttcaacaggagggtaaa
gactacattccacttaacaccgctctgtcccccgatggtgatgcaaactccacacaaggt
ggcacagaagaaagcttgaaaaattctattgttcgatggagtcgatggagcttgctggaa
attggaaataagatcaagatgcgacctctgagcgtgaagacatttgacgaggtgccagtg
ggaaaggaggaagcactgcatgaggagagtgagtccgacagcggcatggtcctgtcctct
gaagagatgaaaagcctgaagagacaggagactcgatcttggccattcgggattatggcc
ttcaaaaagacagcagtcagcaaaaataaagaatcagtgttaacagaaatcaggcgagag
atgattaagtaccagccggctgcccagaccgaagacgacacccttgactgtacactggaa
gattttgtccttctcccgatggatctgagcctcgaatgtcatagcccgcctcctgattac
aactccgtggttcactactccacacctccagtatag
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