Geotrypetes seraphini (Gaboon caecilian): 117361565
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Entry
117361565 CDS
T09159
Symbol
RAPGEF4
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04081
Hormone signaling
gsh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
117361565 (RAPGEF4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117361565 (RAPGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117361565 (RAPGEF4)
Membrane trafficking [BR:
gsh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
117361565 (RAPGEF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
117361565
NCBI-ProteinID:
XP_033802981
UniProt:
A0A6P8R4I8
LinkDB
All DBs
Position
5:complement(199587489..199839445)
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AA seq
1020 aa
AA seq
DB search
MVAAHGSHSSASAEWIACLDKRPLERSGEDVDIIFTRLKEVKAFEKFHPNLLQQICFCGY
YENLEKGVTLFRQGDIGTNWYTILTGSLDVKVTSTSNHQDAVVICTLGIGTAFGESILDN
TPRHATIVTREYSELLRIEQKDFKVLWEKYRQYMAGLLAPPYGVMETGSNNDRISDKEMM
NTLKHCNKTPLIEHPILLRPDKTITQIPSERILRAGKILRNAILSRAPHMIRDRKYHLKT
YRQCCVGTELVDWMMQQTPCVHSRTQAVGMWQVLLEEGVLNHVDQEYHFQDKYLFYRFLD
DEHEDAPMLTEEEKKESDEELQDTFLLLSQIGPDAHMRMILRKLPGQRTVDDLEIIYEEL
LHIKALSHLSTTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIILKGSVNVVIYGKGV
VCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHD
QDVLVLEKIPAGTRASSQGNSQSQYKYSVMSGTPEKILEHLLETMRLDTSLNEAADSVLD
DFVQMHYVFMPNSQLCPALMAHYHAQPSQGTEQEKMDYAYNNKRRVVRLVLQWTNLYSDL
LQEDEVAMAFLEEFYVSVSDDTRMIPALKDQLLDLEKIVKKFSEEAKAPQKKHKVLLRQF
STGDERLQKRQPIRSTDEILFKVYCIDHTYTTIRVQVAASVKEILSAVADKLGSGDGLIL
VKISSSGEKVVLKPNDVSVFTTLSVNGRLFACLRDQFDSLTPLAEQEGPSAGSIGTFELM
SSKDLAYQMTVHDWDLFSCVHELELIYHTFGRHNFKKTTANLDLFLRRFNEVQFWVVTEI
CLCSQLSKRVQLLKKFIKIAAHCKEYKNLNSFFAIVMGLSNVAVSRLSLTWEKLPSKFKK
IYAEFEGLMDPSRNHRAYRLTVAKLDPPIIPFTPLLIKDMTFTHEGNKTFIDNLVNFEKM
RMIANTVRTIRYCRSLPFNPDAALANKNHQDVRGYVRQLYLIDNQRTLSQLSHRLEPRRA
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggttgctgcccacggctcccattcttccgcatctgctgagtggattgcctgcttagat
aaaagaccattagagcgctctggtgaagatgttgatattatatttacacgactgaaagaa
gtgaaagcgtttgaaaagtttcatccaaatcttcttcaacaaatatgtttctgtggctat
tatgaaaatttggaaaaaggagtaactttatttcgccaaggtgatattggaaccaattgg
tatactatcctaactggctctctggatgtgaaggtgaccagtaccagcaaccatcaggat
gctgtggtaatctgcactttgggaattgggactgcttttggagagtccattctggataat
actcctcgtcatgctacaattgttaccagggagtacagtgagctcctccgcatcgaacag
aaggacttcaaagtactttgggagaaatatcgacaatatatggcaggacttttggctccc
ccatatggtgttatggaaactggttctaataatgacaggatctctgataaggagatgatg
aacactctcaaacattgcaataagacacctctcattgaacaccctatcctgcttcgtcct
gacaaaaccattactcagattccatcggaaagaatcctaagggctggaaagattttacgg
aatgcaattctttcccgagctcctcatatgataagagatcgtaaatatcatctaaaaact
tacagacagtgctgtgtagggaccgaactggtagactggatgatgcaacaaaccccttgt
gttcattcaagaacacaggccgtcggcatgtggcaagtgttacttgaggagggtgttctg
aaccatgtggaccaggaataccatttccaggacaaatacttgttttatcgatttctggat
gatgaacatgaagatgccccaatgctgacagaagaagagaagaaggagagtgatgaagaa
ctgcaagacacgtttcttttgctctctcagattgggccagatgctcatatgagaatgatt
ctcagaaaactgcctggccagagaacagtagatgacctagaaattatatatgaagaatta
cttcacataaaggccttatctcacctttctaccacagtaaaacgagaattagcaggagtt
ttaatttttgaatctcacgccaaagctggaacagttttatttaatcaaggagaagaaggc
acctcatggtacattatcctaaagggatcagtaaatgtggttatttatggaaagggggtt
gtctgcactctgcacgagggagatgattttggcaaattagcactagtgaatgatgctcca
agggcagcctccattgtcctgcgagaggacaattgccacttcctgagggtggacaaggag
gacttcaacagaatcctaagggatgttgaagcaaatacagtacgactcaaagaacatgac
caagatgtcctggtgttggagaagattcctgcaggcacaagagcttctagtcaaggaaac
tcccagtcacagtataagtacagtgtcatgtcgggaactccggaaaaaattttggagcac
ttactggaaacaatgcgtcttgacaccagcctaaatgaagcagcggattcagttttagat
gattttgttcagatgcactatgtttttatgccaaatagccagctttgcccagctttgatg
gcacactaccatgcccagccttctcaaggtaccgagcaggaaaaaatggactacgcttac
aacaataaacgacgggttgttcgcttggtgttacagtggactaatctctacagtgatctc
ttgcaagaagatgaagtggcaatggcttttctggaggaattttatgtttcagtctcggat
gacaccagaatgattcctgcactgaaagatcagctcctggaccttgaaaaaattgtaaaa
aaattttcagaagaagccaaggcaccacaaaagaagcacaaagtcctgttgcgacagttt
agcacaggtgatgaaagactgcagaagcggcaaccaatcaggagcacagatgaaatactc
tttaaggtatactgcatagaccatacctacaccacgattcgtgtacaagtagctgcttca
gtgaaggaaatactcagtgcagtagcagataaactcggctctggggatggactaatattg
gtgaagatcagttcttcaggagaaaaagtggtcctcaagcctaatgatgtttcagtgttc
accacactgagtgttaacgggcgcctctttgcttgtctacgtgaccagttcgattcactg
acacctcttgcagagcaagaaggtccttctgctggaagtataggaacatttgaactgatg
agttctaaggacctagcctaccaaatgactgttcacgattgggacctcttcagctgtgtg
catgagttggagctcatatatcatacatttggacggcacaattttaaaaagaccacagca
aacttagatctgtttttgagaaggtttaatgaagttcagttctgggtggtaacagagatt
tgcctctgctcccaactgagcaaacgtgtccagctcctgaagaaatttattaagatagca
gctcactgcaaagaatacaaaaatctgaattcattttttgccattgtcatgggtctaagt
aatgttgctgtgagccgtctgtccctaacatgggagaaactaccaagcaagttcaaaaag
atctatgcagaatttgaaggtttaatggatccatcaagaaatcatagagcatatagactt
actgtagccaaactggacccacctatcattccctttacacccttactcataaaagatatg
acttttactcatgaggggaacaagacatttattgataatttagtaaactttgaaaaaatg
cgcatgattgctaacacagtaagaacaataaggtactgcagaagcctgcctttcaatcct
gatgctgccctagctaacaagaaccatcaggatgtccgaggatatgtacgacagctgtat
ctcattgacaaccagagaacattatcacaactctcacaccggctggagccacgacgagca
tga
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