Geotrypetes seraphini (Gaboon caecilian): 117362992
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Entry
117362992 CDS
T09159
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117362992 (TRPC6)
Ion channels [BR:
gsh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117362992 (TRPC6)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
117362992
NCBI-ProteinID:
XP_033805992
UniProt:
A0A6P8R883
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Position
6:complement(33021012..33173979)
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AA seq
896 aa
AA seq
DB search
MNQSRPYITRNNNRPVSTTRNESRDYLIMNADAGSKMHAYGYYPERSTESRLAHRHQTLI
REKGRRQANRGPAYMFSEHSTSLSFEEERFLDAAEYGNIPVVRRMLEECDSLNVNCVDYM
GQNALQLAVANEHLEITELLLKKENLARIGDALLLAISKGYVRIVEAILSHPSFAEGKRL
TISPSQSELQHDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHILLRKGARIERPHDYF
CKCNKCTQKQKDDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLANIEK
EFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDMEINQTHVEPGGRPSLCRLKLAI
KYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTIAVKFLVVLAVAVGLPFLSMAYWIAPCS
KLGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLRPNETSTDHAKQLFRMKTSS
FSWMELLIISWVVGMIWSECKEIWSQGPREYLFELWNILDFGMLAIFAASFIARFMAFWH
ASKAQNYVDVDENIKNLANATLPPEIEYYTFARIKWLPSDPQIISEGLYAIAVVLSFSRI
AYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYAYYLGAKQNDAFTT
VEESFKTLFWAIFGLSEVKSVVINYGHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSS
FQEIEDDSDVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLLCILVRIRAFISKLFTC
HQKGFQEDSEMNKLGQSKHSSIRSSEDGNLNSLSNAPTKYQKIMKRLIKRYVLKAQIDKE
SDEVNEGELKEIKQDISSLRYELLEEKSQNTEDLAELIRKLGEKLLIEPRLEESNR
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaagccggccctatataactcgcaataataaccgtccggtctccactacgagg
aacgaaagccgagactatctgatcatgaatgccgacgcaggaagcaagatgcatgcctat
ggctattaccccgagcgaagtactgagagcagactggcacatcggcatcagaccttaata
cgagagaaaggcagaaggcaagcaaatcgaggaccagcatacatgttcagtgagcattca
acgagtctttcttttgaagaagagcgcttcttggatgcagcagaatatggcaacattcct
gtggtaaggagaatgctggaagaatgcgattccctgaatgtgaactgcgtggactacatg
ggccagaatgctttgcagttggcagtggccaatgaacacttagaaatcacagaacttttg
cttaagaaagagaacctggcgcggatcggtgacgctttactcctggcgataagtaaaggt
tacgttcgcatagtggaagcgatcctgagccatccttcgtttgcagaagggaagaggctg
acgataagccccagccaatcggaattgcagcacgacgacttttatgcttatgacgaagat
gggacgcggttctcgcatgatgttactcctatcattctagctgctcattgccaggaatat
gagattgttcacattcttttgagaaaaggagctcgcattgagcgaccgcatgactatttc
tgcaagtgtaacaaatgcactcagaaacaaaaggatgactcctttagccattccaggtcc
cgaatcaatgcctacaaaggcctggccagtcctgcttacctctccctgtctagtgaagat
ccagtcatgactgcattagaactcagcaatgagcttgcagtactagcaaacattgagaaa
gaattcaagaatgactacaaaaaattgtcgatgcagtgcaaggactttgttgttggactt
cttgatttgtgcagaaacactgaagaagttgaagctattctgaatggggatatggaaata
aaccagactcatgtagaacctggtggacgccctagcctttgccgcttaaaacttgccatt
aagtatgaagttaaaaaatttgtagcacacccaaactgccaacagcagcttctttcgatc
tggtatgagaacctctcaggcttacgacagcagactattgcagtgaagtttctggtcgtt
ctggctgttgccgtaggacttccatttctctcgatggcttactggattgcgccatgtagc
aagctggggaagatcatgcgtggaccctttatgaagtttgtagcacatgcggcttctttc
accattttccttggactgctggtcatgaatgcagctgacagatttgaaggcaccaagctc
agacccaacgaaacgagcacagatcatgcaaaacagctgtttaggatgaaaacgtccagc
ttctcgtggatggagctactcatcatctcttgggtagtaggtatgatatggtctgaatgt
aaggaaatctggtctcagggtcccagggagtatttatttgagttgtggaatattctggac
tttggtatgctagcaatctttgcagcatcgtttattgcaaggtttatggcgttttggcat
gcttccaaagcgcagaactatgttgatgttgatgaaaacatcaagaacttagctaacgca
acgttgcctcctgaaatagaatactacacttttgccagaataaaatggctgccgtctgat
cctcaaatcatatctgaaggcctttatgcaattgcggtagttttaagtttctccagaatt
gcctacattctaccagctaatgaaagctttggacctctccagatatcacttggcaggaca
gtaaaagacattttcaagttcatggtcatatttatcatggtgtttgtggcctttatgatt
ggaatgtttaatctctatgcctactaccttggagcaaagcaaaatgatgccttcacgaca
gttgaagaaagttttaagaccttgttttgggctatatttggactttcagaagtgaaatcc
gttgtcatcaattacgggcacaagtttattgagaacattggttatgttctttacggcgta
tacaatgtcactatggttattgttctactgaacatgctcattgcgatgatcaacagttcc
ttccaagaaattgaggacgattccgacgtagaatggaagtttgcccgagccaaattgtgg
ttttcctactttgaggaaggaagaacacttccagtgcctttcaatttagtaccaagtcct
aagtctttactttgcatcttagtgagaataagagcttttatttctaaactctttacttgc
catcaaaaaggttttcaagaagactcggagatgaataagcttggccagagtaagcattca
agcataagaagttcagaagatggaaatttgaacagcctaagtaacgctccaacaaaatat
cagaaaataatgaaacggctgattaaacgatatgtgctgaaagctcagatagataaggag
agtgacgaggtcaacgaaggtgaacttaaagaaatcaaacaggatatttcaagtcttcgt
tatgaacttcttgaggaaaaatctcaaaatacagaagacttagcagaactcatcagaaaa
ctcggggagaaactgttgattgagcccagactggaagaaagcaacagataa
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