Geotrypetes seraphini (Gaboon caecilian): 117363423
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Entry
117363423 CDS
T09159
Symbol
EXD2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117363423 (EXD2)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
117363423 (EXD2)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117363423 (EXD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DUF7194
Cytochrom_c3_2
RRXRR
Motif
Other DBs
NCBI-GeneID:
117363423
NCBI-ProteinID:
XP_033806991
UniProt:
A0A6P8RPB9
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Position
7:106394924..106460687
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AA seq
647 aa
AA seq
DB search
MSVRRAARQPSDLVTRKHATLFSLRRMSKHTTLTLAAATMVGTAVGCLVLWNVFKRRKGW
LSLFGKKRSVIKGLGGENRKVAEGSEALLFYAPPAISFVEKIFESEVVLVSQPEEWERVR
PLLEKELQEYPVVGMDCEWVSVEGKAKPVSLLQLASYSGLCVLVRLPTVVNNAQTVPKTL
LDMLVDDNILKVGVGCWEDACKLLQDYGLTVKGNVDLRYLAKRHRMDISRNGLSLRSLSE
NILSIPLEKSLWLRCSNWEAEELTQDQISYAAKDAQISVTLFFHLLGCSSIQISRGEMFP
CSWEKILGMCQDLVDMPFKGRGNCGMGDDDNGQVNSQQKVKQRKTVPSIQQVLNIQQGKD
PRKHKRKPLGAGYSARKAPFYDNCFLHAPDGQPLCTCDRKKAQWYVAKGIGELVSSDPFI
VKLSFEPSGRPESQVDYYLTVKENLCVVCGKQESYIRKNIVPHEYRRHFPIQMKDHNSHD
VLLLCTSCHAVSNYYDNQLKQNLAEEFSAPIGCEEGIRLLEDPLRRQVRSGARALLSVES
LPHQRKEELLKGIRTFYGTTTVTTEMLQEAAAMETRIFNESYIPHGLKVVHCYAKGGLRS
LMQLEKRWRQHFLDTMQPNYLPQRWSVDHNHSKLLREFGDDLEIGLS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaggagggctgctcggcaaccgagtgatttggtaacaagaaaacatgcaaca
ttattttcactgagaagaatgtccaaacatacaaccctaacgttggctgctgccactatg
gtgggcactgcagtgggatgtcttgttctgtggaatgtgttcaaacgtcggaaaggatgg
ttgagccttttcgggaagaaaagatcagttataaaaggactaggtggtgagaacaggaaa
gtggcagaaggtagtgaggcacttcttttttatgctcctccggccatttcctttgtggaa
aagatatttgaatcagaagtggtgctggtttctcaaccagaggaatgggagagagttagg
cctctgctggagaaggagctgcaggaataccctgttgttggaatggactgtgagtgggta
tcggtagaaggaaaagcaaagcctgtgtccctcctgcagctggcttcctatagtgggctt
tgtgtcttggttcgtttacccacagtggttaacaatgcacagactgtcccaaagacttta
ttagacatgttagtggatgacaacattttgaaagttggagttggatgctgggaagatgcc
tgcaagttgctacaggattatggcctgactgtgaaagggaatgtggatcttcgatatctg
gctaagagacacaggatggatattagtcgtaatggactcagcttgaggtctttatctgag
aacattctgagcatcccccttgaaaaatctctctggcttcgttgcagtaattgggaggca
gaagagctgactcaggatcagatcagttatgcagccaaagatgcacagatctctgtgact
ctgtttttccacttgctgggatgctcctccattcagatatcgagaggcgaaatgtttcca
tgttcctgggaaaagattttggggatgtgccaggacttggtggatatgccatttaaagga
agaggaaattgtggcatgggtgatgatgacaatgggcaagtgaattctcaacagaaagtg
aagcaaaggaagactgtgcctagcatccagcaggtactgaatattcagcaagggaaggat
cccaggaagcataaacggaaaccgctcggggcaggctattcagcaagaaaagcacctttt
tatgacaactgctttctccatgctccagatggtcagcctctttgcacttgtgatcgcaag
aaagctcagtggtatgtggccaaaggaataggagagctggtgagcagtgatccattcatt
gtgaagctaagctttgagccatctggacgacctgagtcacaggtggattattatctcaca
gtcaaagagaacctatgtgtggtatgtggcaagcaggagtcatacatccgaaagaatatt
gttccacatgagtacaggaggcacttccctatccagatgaaggatcacaactcccatgat
gtgctgctgctgtgtacctcctgccatgctgtctctaactactatgacaaccagctgaaa
cagaacttagcagaggagttcagtgcccctattggctgtgaggaagggattcgtctgctg
gaggaccctttgcgcaggcaggtgcgctcaggtgccagggcgctgctcagtgtagagagc
ctccctcaccagaggaaggaagagctgctgaaagggataaggactttttatggcactaca
actgttacaacagagatgcttcaagaagcagcagcaatggaaactaggatttttaatgaa
agctacatacctcatggactgaaagtggtgcactgctatgccaagggaggtctgcggtcc
ctgatgcagctagagaagcgctggcgccagcactttctggacaccatgcagcccaactac
ctcccgcagcggtggtcagtggaccacaatcacagcaaactgctcagagagtttggggat
gatttggagatcgggttgtcatga
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