Geotrypetes seraphini (Gaboon caecilian): 117364101
Help
Entry
117364101 CDS
T09159
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04620
Toll-like receptor signaling pathway
gsh04621
NOD-like receptor signaling pathway
gsh04622
RIG-I-like receptor signaling pathway
gsh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117364101 (TRAF3)
04621 NOD-like receptor signaling pathway
117364101 (TRAF3)
04622 RIG-I-like receptor signaling pathway
117364101 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117364101 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
ATG16
zf-C3HC4
MPS2
MogR_DNAbind
zf-C3HC4_2
ADIP
zf-RING_6
DUF3450
Spc29
DUF4731
Crescentin
CLZ
Motif
Other DBs
NCBI-GeneID:
117364101
NCBI-ProteinID:
XP_033808840
UniProt:
A0A6P8RTB2
LinkDB
All DBs
Position
7:complement(159881954..160018929)
Genome browser
AA seq
575 aa
AA seq
DB search
MAVPQFSYYNMDAGRTLEPTVSVQAVQQKVNPDRSLEITIYVPEQGGYREKFLKPVEEKY
KCEKCHLVLCNPRQTECGHRFCETCMTALLSSSSPVCVACQEIIIKDKVFKDNCCRREVL
ALQMYCRNENRGCKEQITLGRLLVHLKSDCLFEELTCPRSDCKEKVLRKDLSDHIEKSCK
YRETTCKYCKSHVPIIELQKHEEMECPSVLVSCPHNCSVKSLLRSELNAHLSECVNAPST
CSFKRYGCSFKGTKQQIKAHEASSAVQHVNLMKEWSNSLEAKVSMLQNESSEKNKSIQSL
YNQMCSFEVEIERHKEMLRNNESKILQLQRVIDGQADKLKELDKEIRFLRQNGDEADSMK
SSMESLQTRVAQLESISKSTSARNSGVLETQINRHDQMLSVHDIRLADMDLRFQVLETAS
YNGVLIWKIRDYKRRKQEAVLGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSL
FFVIMRGEYDALLPWPFKQKVSLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASG
CPVFVAQTVLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcccgcaatttagctattataacatggatgctgggagaacgttagaacccact
gtatcagtgcaagcagttcagcaaaaagtgaatccagatcgaagccttgaaattactatt
tatgtgccggaacaaggaggttacagagagaaatttttgaagccagttgaagaaaagtat
aaatgtgaaaagtgtcaccttgtgctctgcaatcctagacagacagaatgtggacacaga
ttctgcgaaacgtgtatgactgcattactgagttcttctagtccagtatgtgttgcttgt
caagaaatcatcattaaagataaggtatttaaggataactgctgtaggagagaagtactt
gctcttcaaatgtactgtagaaatgaaaacagaggctgcaaagaacaaataacattggga
agactactggtccatttgaaaagtgactgcctgtttgaagagctcacatgccctcgttca
gactgcaaagaaaaagttttgagaaaagacttgtcagaccacattgaaaagtcctgtaaa
tatagagaaacaacatgtaaatactgcaagagccatgttccaatcattgaattacagaaa
catgaagaaatggagtgtccatctgtactagtttcatgccctcataactgtagtgttaaa
agccttttgagaagtgagttgaatgcccatttgtcagaatgtgttaatgccccaagtacc
tgtagttttaaacgttatggatgcagttttaagggaacaaagcaacagattaaagcacat
gaagccagttcagcagtgcaacatgtcaatttaatgaaagagtggagtaattctctagaa
gcaaaggtgtctatgctccagaatgaaagctctgagaaaaacaagagtatacaaagtttg
tacaatcagatgtgcagctttgaggtagaaattgagcgacataaggaaatgctgaggaat
aacgagtccaaaatacttcagctacagagagttatagatggccaagccgacaaactgaaa
gaattggacaaagaaatacgctttttacgtcagaacggggatgaggctgatagtatgaag
agcagcatggaatctctgcaaacaagagtagcacagctggaaagtattagtaaaagcaca
tcagcccggaactcaggagtgctggaaacacagataaaccgacacgatcagatgctcagt
gttcacgatatccggctagctgacatggacctccgattccaagtcttggaaacagctagt
tacaacggagtgctgatctggaaaatacgtgactataaacggaggaagcaagaagcagtt
ctgggcaagactctgtctttgtatagtcaaccattctatactggatactttggttacaaa
atgtgtgccagagtttaccttaatggagatgggatgggaaaaggaacacatctatcactg
ttttttgttataatgcggggagaatatgatgccttgcttccttggccttttaaacagaag
gtgagcctcatgttaatggaccagggaccttctcgccggcacttaggagacgcgttcaaa
ccagacccgaacagcagtagtttcaagaaacctactggagaaatgaacattgcgtctggc
tgtccagtctttgtggcccaaactgttctcgaaaatggaacctacattaaagatgatact
atttttattaaagtcatagtggatacctcagatttgccagacccttga
DBGET
integrated database retrieval system
