Geotrypetes seraphini (Gaboon caecilian): 117366914
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Entry
117366914 CDS
T09159
Symbol
CACNA2D1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04010
MAPK signaling pathway
gsh04260
Cardiac muscle contraction
gsh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117366914 (CACNA2D1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117366914 (CACNA2D1)
04261 Adrenergic signaling in cardiomyocytes
117366914 (CACNA2D1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117366914 (CACNA2D1)
Ion channels [BR:
gsh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117366914 (CACNA2D1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
MCP-like_PDC_1
dCache_1
Phage_int_SAM_5
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
117366914
NCBI-ProteinID:
XP_033814818
UniProt:
A0A6P8SDG9
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Position
9:complement(859008..1379388)
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AA seq
1093 aa
AA seq
DB search
MAAGCLLLLTLTLLQSRLISPSPEEPFPSSTTIKSWVDKMQHDLVTLARTASGVNQLADI
YMKYKDLYRVEANNAHRLVESAAREIEKLLSNRSKALVRLAQEAEKFQKAHQWQDDFGAN
DIVYYNAKDDPEKNDSNSDRQRIKPVFEKDPVFRRQTSYQHAAVHIPTDIYEGSTIVLNE
LNWTGALDDVFKRNREEDSTLLWQVFGSATGLARYYPASPWVNKTTIDLYDVRRRPWYIQ
GAASPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDDYVNVASFSNNAQDVSCFTH
LVQANVRNKKVLQEAVHKMGAKGMTDYKKGFSFAFDQLLNFNVSRANCNKIIMLFTDGGE
EKAQEIFKKYNNDKKVRIFTFSVGQHNYDKGPIKWMACNNKGYYYEIPSIGAIRINTQEY
LDVLGRPMVVAGEKAKQVQWTNVYLDALELGLVITGTLPVFNLTKNHNGHKNLLILGVMG
VDVSLEDIKRLTPHFTLCPNGYYFAIDPNGYVLLHPNLRPESIGVGIPTVNLRKRRPGIQ
NPKFQEPVTLDFLDAELENEIKVEIRNQMIDGKSGERTFGTLIKSQDERYIDKGNRTYTW
TPVNGTDYGLALVLPPYSFYYIKAKLDETILQAKYTETLKFDHFPETGYTFIAPREYCKD
LKLSDNNTEFLLNFNDYIDKKTPNSNSCNTDMVHRVLLDAGFTNELVQYWSKQSLSGILS
RFVVTDGGITRVYPESAGKNWTENPETYEDSFYKRSLDNDVYVFTAPYFNNNEIDDYEDG
IMVSKAVEITVDGKLLKPAVVGIKIDVISWLDNFTKATTKSPCKSEICDCETDSMQVDCV
ILDDGGFLLMSNQGDYRKQIGRFFGEIDPSLMRKLIDVSLYAFNKSYDYQSVCDPGKEPT
QDAGLRSVYVPTIADILNLGWWASAAAWSLLQQLFWSLTFPHLLEAVDYEDQEFPATVSK
QSCITEQTQYFFDNSNKTFYGVLDCENCSRIYHAEKLLETNLVFIIVDSKKTCLPCDSRP
LIQAEQPSNGPNPCILVQDPRHRKGPDLCFDDNTLENYTDCGGVSGLNPSLWFMVGIQLF
LVWLLSGSRHCLL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggctgcctcctcttgctcaccctcactctcctgcagtcccggctcatcagt
ccttctccggaagagcccttcccttcttcgacgaccataaagtcttgggtggataagatg
caacatgacctggtaactctggcaagaacagcgagcggtgtgaaccagctagcagatatt
tatatgaaatacaaagacttatacagagtagaagccaacaacgcccaccgcctggtggaa
agcgcagcccgagagattgaaaagctactgagcaaccgatccaaagctctggtgcggctt
gctcaagaagcagagaaatttcaaaaagcgcaccagtggcaagatgattttggggccaat
gacattgtgtactacaatgctaaagatgatcctgagaagaatgacagcaactctgacagg
cagagaatcaaacccgtgtttgagaaggatccagtatttcgacggcagacttcttaccag
catgctgcagtccacatccccacagacatctacgaaggctccactatagtgttaaatgag
ctgaactggacaggagcattggatgatgtgtttaaaagaaacagagaggaagattcgact
ttgttgtggcaggtgtttggcagtgcaacaggcctagccagatattatccagcctcacca
tgggtaaataaaaccacgattgatctatatgatgtgcgaagacgtccttggtacatccag
ggagcagcgtctccgaaagacatgcttatccttgtagatgtgagtggaagcgtcagtgga
ctgaccctgaagctgataagaacatctgtttctgaaatgctggagacactatcagatgat
gactatgtgaatgtagcctcgttcagtaacaatgcccaggacgtgagctgcttcacccat
cttgtccaagctaatgtaagaaataagaaagttctccaggaggctgtccataaaatgggt
gccaaaggtatgacggactataagaaaggcttcagtttcgcttttgaccagcttctgaat
ttcaatgtctccagagccaactgtaataagattattatgttgtttactgatggtggtgaa
gaaaaagcacaagaaatatttaagaaatacaacaatgacaaaaaagttcgtatatttact
ttttctgttggccagcacaattatgataaaggacccataaagtggatggcctgcaataac
aaaggatactattatgaaatcccttctatcggagctattagaatcaacacacaggaatat
ttagatgttttgggaagaccgatggttgttgctggagagaaagccaaacaagtccaatgg
accaatgtctatttagatgctctggaacttggacttgtcataacaggaactttgcctgtc
ttcaatctaacaaaaaaccacaacgggcacaagaaccttctgatccttggtgtgatggga
gtggatgtgtcactggaagatatcaagagactgacgccacactttacgctgtgtccaaat
ggctattactttgcaattgatccaaatggctacgtactgctccatccaaatcttcgaccc
gagagcattggtgtaggtatccctacagttaatctgagaaagagaaggcccggtattcag
aatcccaaattccaggaaccggtcacgctggacttcctggatgctgagctggagaatgaa
attaaagtggagattcgaaatcaaatgatagatggaaaaagtggagagcggacatttgga
acactgattaagtcgcaagatgagagatacattgacaaaggaaacagaacatacacctgg
actcctgtgaatggaaccgattatggtttggctttggtgttaccaccctacagcttttac
tatattaaagccaagttagatgagacaattcttcaagccaaatatacagaaactctgaag
tttgatcattttcctgaaactggatacacttttatagctccaagggagtattgtaaagac
ttaaaactctctgataacaacacagaattcctcttaaattttaatgattatattgataaa
aaaactccaaacagcaactcatgtaacacagatatggttcacagggtgctactggatgct
ggatttaccaatgaacttgtccaatactggagcaaacagtctctcagtggcattctctcc
agatttgtggttacagatggtggtattaccagagtgtacccagaaagtgctgggaaaaac
tggacagaaaatcccgaaacctacgaagacagtttctataaacgaagtttggataatgac
gtctatgttttcactgccccctactttaacaacaatgagatcgatgactatgaagatgga
ataatggtcagcaaggctgtagaaataactgttgacgggaaactgttaaaacctgcagtt
gttggaataaaaattgatgtgatcagctggttagacaatttcaccaaagctacaaccaag
agcccgtgcaagagtgagatctgcgactgtgaaacggatagtatgcaagtggactgtgtg
atcttagacgatggtggattccttttgatgtccaatcagggtgattataggaaacaaatt
ggcagattctttggagaaattgaccccagcctaatgcgaaaactcattgatgtttccctc
tacgcttttaacaaatcctatgactaccagtccgtgtgtgatcctggcaaagaaccaacc
caagatgctggccttcgctccgtttatgtgcctacgatagcagacattttaaacttaggc
tggtgggcttctgctgctgcatggtctctactgcagcagctgttttggagcttaacattt
ccacatttgctagaggcagttgactatgaagatcaggaattccctgctaccgtttccaaa
caaagctgcataactgagcaaacacaatatttctttgacaacagcaataaaacattttac
ggtgttctggactgtgagaactgctctagaatttatcatgcagaaaagcttttggagacc
aatcttgtatttataattgtagacagtaaaaagacctgcctcccatgtgactcaagacca
ctcatccaagcagagcaaccttctaatggccccaatccttgcatactagttcaggatcca
cgccacagaaaggggccagacctctgttttgatgacaacacgctggaaaattacacagat
tgtggtggtgtctctggactgaatccatcactatggttcatggtaggaatccagttattt
cttgtgtggcttttatcaggcagcagacattgtctattatga
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