Geotrypetes seraphini (Gaboon caecilian): 117367273
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Entry
117367273 CDS
T09159
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117367273 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117367273 (IRF5)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117367273 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
DUF3824
Motif
Other DBs
NCBI-GeneID:
117367273
NCBI-ProteinID:
XP_033815604
UniProt:
A0A6P8SBG2
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Position
9:complement(19830294..19883857)
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AA seq
509 aa
AA seq
DB search
MNSHPRRIRLKPWLIAQVNSGQYPGLQWENQERKLFRIPWRHATRHISIQDDENTIFKAW
AKETGKYQEGVDEPDPAKWKANLRCALNKSREFKLLYDGTKDTPMQPFKIYEVCDILQPN
GDSLAGDEYICGQDEEELQDMMPRLHIKADSGHSTDNSAPPYMWIKSEVPFSSSCVNEPF
PHMSHLSLVHPNINTIPPPPSSVSFPGVDLQPQNVALPDIAVPGRIETLPAPEGGPMLQP
MDQLIPDLLISPHMLPLTDLEIKFLYRGKQAGCLTVSNPHGCRLYYSNLEPTPDQVALFG
PMTLEQVCFPTTDSIPNDKQRYYTNQLLDVMDRGLILELQGQDIYAIRLCQCKVFWSGPC
TPSHTGPNPIEREKKIKLFSLETFLNELIMCQKGQASTIPPFEIFFCFGEEWPDRKPKEK
KLITVQVIPVAARILSEIFSGELSWSADSIRLQISHPDLKDKMVGQFKELHQLWQTQQAL
HAPSAHGDVPDQMQAPESGPWPMQTSSMQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacacccgcggcgcatccgtctgaagccctggctcatcgcccaggtcaacagc
gggcagtacccaggcctccagtgggaaaaccaagagcgcaagctgttccgtattccctgg
cgccatgccaccagacacatctccatccaggatgacgagaacactatattcaaggcctgg
gcaaaagaaactgggaaataccaggagggagtggacgaaccggaccccgctaagtggaaa
gctaatctgcgctgtgctttgaacaagagccgtgaatttaagctactttatgatggcaca
aaggataccccaatgcagcctttcaagatctatgaagtctgcgacattctacagcctaat
ggagactctctagctggtgatgaatatatctgcggccaggatgaagaagagctgcaggat
atgatgcccaggctgcacataaaagcagattctggccacagcacggacaactcagcacct
ccttatatgtggatcaagtccgaagtgccgttctccagctcatgcgtgaatgagcctttc
cctcacatgagtcatttgtcactagtccatcctaacattaacaccatcccgcctcctccc
tcttccgtgagctttcctggagtcgatctgcagccacagaatgtagctctgcccgatatt
gcagtgcccggacgcatagagaccctccctgcccctgaaggtggacctatgctgcaacct
atggatcagctcatcccagacctgctcatcagccctcacatgcttccattgacggatctg
gagatcaagtttttgtatcgagggaagcaggcagggtgcctgacggtcagcaacccccac
ggctgccgcctctactacagcaacctggagcccaccccagaccaggtggctctgtttggg
cccatgacattggagcaggtgtgcttcccaaccacagacagcattcccaacgacaagcaa
cgctactacaccaaccagttactggacgtgatggaccgcggcctgatcctggagttgcag
ggtcaggacatttacgccatccggctctgccagtgcaaggtcttctggtcaggcccctgc
accccgagtcatacgggtcccaaccccattgaacgggagaagaagattaaactcttcagt
ctggagacctttctcaatgagcttatcatgtgtcagaagggacaggcaagcactattccc
ccctttgaaattttcttctgttttggagaggagtggcctgatcggaaacccaaggagaaa
aagctcattactgtacaggtgatcccagtcgctgcccggattctgtctgaaatcttctcg
ggagagctgtcctggtcagctgacagcatccggcttcagatctcccacccagacctgaag
gacaagatggtcgggcaattcaaggagctccaccagctctggcaaactcagcaggcactg
catgcgccatcagctcatggggatgtgccagatcaaatgcaggcacccgagtcgggaccc
tggcctatgcaaactagcagcatgcagtga
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