Geotrypetes seraphini (Gaboon caecilian): 117367711
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Entry
117367711 CDS
T09159
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117367711
Ion channels [BR:
gsh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117367711
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Spidroin_N
Cas_Cas1
Motif
Other DBs
NCBI-GeneID:
117367711
NCBI-ProteinID:
XP_033816427
UniProt:
A0A6P8SDX3
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Position
10:145837954..145892654
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AA seq
1218 aa
AA seq
DB search
MALEKDQSWIPKVFKKKTCTTFIETTEENGGVQVCQCGSPRYAHVSVAVEDNFGAAIVSK
WNSNEHTTEEPTDAYGVVEFVGAGKKHSKFIRLSNETDSAVVYKLITQHWGIPPPNLVVS
VLGGVGEENIRSWLKDILRKGLVKAAQSTGAWIMTKGLQVGIGKYVGEAVRDHATASTNS
RIKVVAMGIAPWGVVSKREKLINPKGSFPARYYMENKGGPYYSLDNNYSAFLLVDDGTEQ
RMGGERVFRARLEEHISHQKIGIGGKGSIEIPVLCMLIAGEAQMVTRVYKATKSNIPCLL
VAGSGGAADCLAKILEQALTLEAVRPLVEKKLKQYFPKEDVSRLANQVEQIMENRELVTV
YSHQDDLEDFETVILNALVKACKKQSSDAIEYLDELKLAMAWNRVDTANTEFFHGEIHWK
TNDLEDTLTDALINDKTDFVKLFIENGLNLVDYLTYGQLEELYRSVPENSVIYELLARKQ
EEREASRLHHHEYQLVDTSFKGKDFKLYDVSKVLRELLGDICSTFYSQQLGSYKIQSNRK
FSNAKTPLKAAQNMRYDTQKSSMPWVDLFIWAILQNRKEMANYFWEMGSDSVASALAATK
ILTELARFALEAEEAQAMRELARTFEHLAIGVFNECYRDSESRAFHLLVRCSSRWQGATC
LQLAYEADARNFFSQDGVQSMLTENWWGQMEQTTPVWKLILTFFCPPLVYSGLIDFKVME
EDRMSDVPDGLELESLNADVNAHNPETTDGENLLEEMEKEEENGKEPVVPGPTLEPPGEN
VKLKRIRPFWLRRWKQFWSAPITAFLGNVVMYFAFLFLFSYVLLLDFKLAPPDGPSTSEG
ILYFWVFTMVCEEIRQSFFVGNAPVAQKVKQYMQDSWNHVDITALLMFMVGLSCRMFPQT
FEAGRTILCFDFMIFTLRLIHIFAVNKELGPKIIIVQKMMKDVFFFLFFLGVWLIAYGVA
TEGLLHPSDMRLTWIFRRVFYRPYLQIFGQIPLDEIDAARITISNCTDDPLSIFMEKAPP
CPNTYANWLVLLLLVVFLLVANILLLNLLIAMFSYTFSKVQENSDIYWKFQRYNLIVEYH
NRPVLAPPFIIISHIHTFIKRKIRKVESMKVKHFKLQLEGPQDSRMLIWEAVQKENYLVN
VAKIKRDSDTERLRRTSQKVDQALKHLTEIKDQDRRLKALESEMESLNSAISWMIEALSQ
SEVIKCTTPPPRLKRSKC
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggcactggagaaggaccagagctggattcccaaggtgttcaaaaagaagacctgcact
accttcattgagaccacagaggaaaatggcggagtgcaagtgtgccagtgtgggagcccc
agatatgctcacgtgtctgtggcagtggaagataacttcggggctgctatcgtcagtaag
tggaattcaaatgagcataccaccgaggagcccacagatgcctacggggttgtggaattt
gtaggagcaggaaagaaacacagcaagttcattcgcctttcaaatgagacggattctgct
gtggtctacaaactcatcacccagcattggggtatacctccccctaatttggttgtgtca
gtactagggggagtgggtgaggaaaacatacgctcttggctgaaggatattcttcgcaag
gggctggttaaagctgcgcagagcacaggtgcttggatcatgaccaaagggctacaagtt
ggtatagggaagtatgttggagaagcggtccgggatcatgccacagctagcaccaactcc
aggatcaaagtggtggccatggggattgcaccgtggggtgttgtgagcaaacgggagaaa
ttaatcaaccctaagggctcatttcctgccagatattacatggaaaacaaaggtggaccc
tactattccttggataataactactctgccttcctgctggtggacgatgggacagaacag
cgcatgggaggggagagagttttccgtgctcggctagaggagcatatctcacaccagaag
ataggcatcggagggaagggaagtattgagatcccagtactgtgtatgctgattgcagga
gaagcccagatggtgacgcgtgtgtacaaagccaccaaaagcaacatcccctgcctactg
gtggcaggatcaggtggggctgctgattgcttggcgaaaatcctggagcaggcgttgact
cttgaagctgtccgtccactagtggagaagaagctgaaacaatattttccaaaggaggat
gtgtccaggctggccaatcaggtggaacaaatcatggaaaatcgtgagctggtaacagta
tactcccatcaggacgatttggaagattttgagactgtcatcctgaatgccctggtgaaa
gcatgtaagaaacagagcagtgatgctattgagtacctggatgagctaaagctggctatg
gcctggaaccgcgtggatactgcaaacactgaattcttccatggggagatccattggaag
acaaatgacctggaagacaccttaacagatgcactgatcaatgataaaacagactttgtg
aagctctttatagagaatggtctgaacctggtggattacctgacatatggtcagctagag
gaactgtacagatctgtgccagagaacagcgtgatctacgagctcctggcacgcaagcag
gaagagcgggaggctagcaggctccatcaccatgagtaccagctggtggacaccagtttc
aaagggaaggacttcaaactctacgatgtgtccaaagtcctgcgggagctgcttggggac
atctgctccactttctatagtcaacagctgggcagctacaagatacagagcaacaggaag
ttctccaatgctaagactccactgaaagctgcccagaacatgaggtacgacactcaaaaa
tcttccatgccctgggtggatctgtttatctgggctatcctgcagaaccgcaaggagatg
gctaattacttctgggagatgggctctgactctgtggcatctgcactggcagccactaaa
atcctcacagagttggctcgttttgcactggaagcagaggaggctcaggccatgagagag
ctagctagaacatttgagcatctggccataggtgtctttaatgagtgctatagggacagc
gaaagtcgggcatttcacctgctggttagatgctctagcagatggcagggggccacttgc
cttcagttggcctatgaggctgatgccagaaacttcttttcacaggatggggtgcagtcc
atgctgacagaaaactggtggggacagatggagcagacaacccccgtctggaagttgata
ctcacctttttctgtccccccctcgtctactctggactcattgacttcaaggtgatggag
gaagacagaatgtcagatgtacctgatgggctagaactggaaagtttgaatgccgatgtg
aatgcacataatcctgaaaccactgatggggaaaatcttctggaggaaatggagaaggaa
gaagagaatggaaaagagccagtggttccaggacccactctagagcccccaggggaaaat
gtgaagttgaaaaggattcgtccattctggctgcgccgctggaagcagttctggagtgcc
cccattacagctttccttggcaacgtggtcatgtattttgccttcctcttcctcttctcc
tatgtactgctcctggacttcaagctggcaccacctgatggcccgtccacctcagagggc
atcctctacttctgggtcttcaccatggtctgtgaggagattcgtcagagcttctttgtg
ggtaatgcacccgtggcacagaaagtgaagcagtatatgcaagactcctggaaccatgtg
gacatcactgccttactgatgttcatggtgggccttagctgcaggatgttcccacagaca
tttgaggctggacggaccatcctttgctttgatttcatgattttcaccctcagattaatt
cacatttttgcagtcaacaaagagcttggacccaaaattatcattgtgcaaaagatgatg
aaggatgtgttcttcttcctttttttcctgggagtttggctgattgcatatggcgtagcc
acagagggactcctgcaccctagtgatatgcgtctgacctggatcttccgacgcgtcttc
taccgcccatatctgcaaatctttggccaaatcccactggatgaaatagatgctgctcgg
atcaccatctcaaactgcacagatgacccattatccatatttatggagaaggctccacct
tgccccaatacttatgccaactggttggttctccttcttcttgtggtcttcctgctcgta
gccaacatcctgctactaaatctgttgattgccatgttcagctacacgttctcaaaagtc
caagagaacagcgacatctactggaaattccagcggtacaatctgatcgtggagtaccac
aaccggcctgtgttggccccacctttcatcatcatcagtcatatccacacctttatcaaa
cgcaagatacgcaaagtggaatccatgaaggtgaaacacttcaagctccagctggaggga
cctcaggatagccgaatgcttatctgggaagctgtgcaaaaggagaattacctggtgaat
gttgcaaaaatcaaaagggacagtgatacggagcgtctgcgaaggacatctcagaaggtg
gatcaggccttgaaacatttaacagagatcaaggatcaagatcgaaggttaaaagcgctg
gagtctgagatggaatctttaaacagcgctatctcgtggatgattgaagctctgtcccag
agtgaagtcataaaatgcactacaccaccccccaggctaaagcggagtaagtgctag
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