Geotrypetes seraphini (Gaboon caecilian): 117367797
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Entry
117367797 CDS
T09159
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04010
MAPK signaling pathway
gsh04137
Mitophagy - animal
gsh04141
Protein processing in endoplasmic reticulum
gsh04210
Apoptosis
gsh04217
Necroptosis
gsh04621
NOD-like receptor signaling pathway
gsh04622
RIG-I-like receptor signaling pathway
gsh04920
Adipocytokine signaling pathway
gsh05132
Salmonella infection
gsh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117367797 (TRAF2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117367797 (TRAF2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117367797 (TRAF2)
09143 Cell growth and death
04210 Apoptosis
117367797 (TRAF2)
04217 Necroptosis
117367797 (TRAF2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117367797 (TRAF2)
04622 RIG-I-like receptor signaling pathway
117367797 (TRAF2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
117367797 (TRAF2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117367797 (TRAF2)
09171 Infectious disease: bacterial
05132 Salmonella infection
117367797 (TRAF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117367797 (TRAF2)
04121 Ubiquitin system [BR:
gsh04121
]
117367797 (TRAF2)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117367797 (TRAF2)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117367797 (TRAF2)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
117367797 (TRAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
CEP104_ZnF
zf-RING_6
zf-C3HC4_2
zf-ACC
zf-C3HC4_4
MATH
DUF5740
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
117367797
NCBI-ProteinID:
XP_033816636
UniProt:
A0A6P8SNR7
LinkDB
All DBs
Position
10:99846608..100063854
Genome browser
AA seq
535 aa
AA seq
DB search
MDITWEPEEVSMVLVHMAATVCPLPGSLETNQPGFPKDILGAKLEGKYLCSHCKNILRRP
FQAQCGHRYCSYCLKTIISSGPQKCAACLQEEIYEEGISILEISSAFPDNAARREVESLP
AVCPNNGCVWKGTIKDFEGTHEGRCPFMLIQCPSCKSMIKLNDMERHNERECPERKLNCK
YCKGAFYFPEIKAHDEICPKFPLTCEGCGRKRIPREKFQDHVKSCGKCKAPCKFYIIGCT
EMVENEKSLEHETKYVSEHLGKLLDFICCMKENRELEHQLGYSLVHVPANNSVLNVPDLS
EFLKKIETLDQKTVTFENIVCVLNREVERISIMIEAYNRQHRMDQEKIESLSMKVRQLER
TIGLKDLVIAEMEQRISDAEVTSYDGIFIWKIADFARKRQEAIAGRCPAMFSPAFYTSKY
GYKLRLRIYLNGDGTGRGTHISLFFVVIKGPNDALLRWPFNQKVTLMLLDQNNREHVIDA
FRPDITSSSFQRPMTDMNIASGCPLFCPITKLESKNSYVRDDTIFIKAIVDLTGL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggacattacctgggagcctgaggaggtctccatggtcttggttcacatggccgcaacg
gtctgtcctctgcctgggtctttggagacaaatcagcctggctttccaaaagatatcctg
ggagcaaaactcgaagggaaatatctttgctcccactgcaagaatatactaaggcgacca
tttcaagctcagtgtggccatcggtattgctcatattgcttaaagacaatcataagctct
ggtccccagaagtgtgctgcatgtctccaggaagagatatatgaagaaggaatttctatt
ttagaaatcagctccgcttttccagataatgctgcccgtcgagaagtcgaaagtctccca
gctgtctgtccaaataatggttgtgtatggaaaggcacaattaaagactttgagggcacc
catgaggggagatgcccattcatgctgatacagtgcccatcctgtaaaagtatgatcaaa
ttgaatgatatggaacgccataacgaacgagagtgtccagagagaaagttgaactgcaaa
tattgcaaaggggccttttacttccctgaaataaaggcccatgatgaaatctgccccaag
tttccactcacttgtgaaggttgtggaaggaaaagaattccgagagaaaagtttcaggat
cacgtaaagtcttgtggcaaatgtaaagcgccttgcaaattctatataataggttgcact
gaaatggttgaaaatgagaaatcactggagcatgaaacaaaatatgtgagtgaacacctt
ggcaagctgctggactttatttgctgtatgaaggagaatagagagcttgagcatcagctg
ggctactccttggtgcacgtcccagccaacaactctgtgctcaatgtacctgacctctcc
gagttcttaaagaaaattgagacccttgaccagaaaacggtgacttttgagaatattgtt
tgtgtactgaatcgtgaagtggaaagaatatcgataatgattgaagcatacaatcggcag
catcgaatggaccaggaaaaaattgagtccctcagtatgaaggtacgtcagttggagagg
actattggtttgaaagatctggtcattgctgaaatggaacagagaattagcgatgcagaa
gttaccagttatgatggaattttcatctggaagattgcagactttgctagaaaacgtcaa
gaagccattgcggggcgttgtcctgccatgttctccccagccttttacacaagcaagtat
ggctacaagctacgtctccgaatctacttgaatggagatggcactggccgtggaacacac
atttctctcttttttgttgtgataaaaggaccaaatgatgcccttttgcgatggcccttc
aaccaaaaggtgaccttaatgttgctggatcagaacaaccgagaacacgtaatcgatgcc
ttcagaccagacatcacgtcttcctctttccagcggccgatgactgacatgaatattgcc
agtggttgtccacttttctgcccaattactaagctggagtctaagaattcttatgtacgt
gacgataccatctttatcaaagccattgttgatctaacaggcttgtag
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