KEGG   Geotrypetes seraphini (Gaboon caecilian): 117368813
Entry
117368813         CDS       T09159                                 
Symbol
ACTB
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03082  ATP-dependent chromatin remodeling
gsh04145  Phagosome
gsh04210  Apoptosis
gsh04510  Focal adhesion
gsh04520  Adherens junction
gsh04530  Tight junction
gsh04810  Regulation of actin cytoskeleton
gsh04814  Motor proteins
gsh04820  Cytoskeleton in muscle cells
gsh05100  Bacterial invasion of epithelial cells
gsh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117368813 (ACTB)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117368813 (ACTB)
  09143 Cell growth and death
   04210 Apoptosis
    117368813 (ACTB)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117368813 (ACTB)
   04520 Adherens junction
    117368813 (ACTB)
   04530 Tight junction
    117368813 (ACTB)
  09142 Cell motility
   04814 Motor proteins
    117368813 (ACTB)
   04820 Cytoskeleton in muscle cells
    117368813 (ACTB)
   04810 Regulation of actin cytoskeleton
    117368813 (ACTB)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117368813 (ACTB)
   05100 Bacterial invasion of epithelial cells
    117368813 (ACTB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gsh03021]
    117368813 (ACTB)
   03019 Messenger RNA biogenesis [BR:gsh03019]
    117368813 (ACTB)
   03036 Chromosome and associated proteins [BR:gsh03036]
    117368813 (ACTB)
   03029 Mitochondrial biogenesis [BR:gsh03029]
    117368813 (ACTB)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gsh04812]
    117368813 (ACTB)
   04147 Exosome [BR:gsh04147]
    117368813 (ACTB)
Transcription machinery [BR:gsh03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     117368813 (ACTB)
Messenger RNA biogenesis [BR:gsh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     117368813 (ACTB)
Chromosome and associated proteins [BR:gsh03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     117368813 (ACTB)
    NuA4 complex
     117368813 (ACTB)
  Chromatin remodeling factors
   BAF complex
    117368813 (ACTB)
   PBAF complex
    117368813 (ACTB)
   GBAF(ncBAF) complex
    117368813 (ACTB)
   SWR1 complex
    117368813 (ACTB)
Mitochondrial biogenesis [BR:gsh03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    117368813 (ACTB)
Cytoskeleton proteins [BR:gsh04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     117368813 (ACTB)
Exosome [BR:gsh04147]
 Exosomal proteins
  Proteins found in most exosomes
   117368813 (ACTB)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 117368813
NCBI-ProteinID: XP_033818422
UniProt: A0A6P8SIX1
LinkDB
Position
11:12461073..12466372
AA seq 375 aa
MEDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaggatgatattgctgcactggttgttgacaatggatctggaatgtgcaaggctggc
tttgctggagatgatgcaccccgagctgtcttcccttccatagttgggcgcccaagacat
cagggtgtgatggttggcatggggcagaaagacagctatgttggtgacgaagctcagagc
aagagaggtatcctgaccctgaaataccccatcgaacacggtattgtcaccaactgggat
gacatggagaaaatctggcaccacaccttctacaacgagctccgtgttgcacctgaggaa
caccccgttctccttacagaggctcccctgaaccccaaagccaacagagaaaagatgaca
cagatcatgtttgaaaccttcaacacgccagccatgtatgttgccatccaggctgttctg
tcgctgtatgcttctggtcgtaccacaggtattgtgatggactctggtgatggtgttacc
cacacggtgcccatctacgaaggttatgccctgccccacgccatcctgcgtctggacttg
gctggccgtgacctgacagactacctcatgaagattctgaccgagagaggctacagcttc
accaccacagcagaaagagaaattgtgcgtgacatcaaagagaaactgtgctatgtcgcc
ttggactttgagcaggaaatggccacagctgcctcctcatcctccctggaaaagagctac
gagcttcctgatggtcaggtgatcaccatcggcaatgagaggttcaggtgcccagaggcc
ctcttccagccatccttccttggtatggaaagctgtggaattcatgaaaccacctacaac
tccatcatgaagtgtgatgttgatatccgtaaggacctgtatgccaatactgtgctgtcc
ggtggtaccaccatgtacccaggaattgcagacaggatgcagaaggagattacagcactg
gcccccagcacaatgaaaatcaagatcattgccccacctgagcgtaagtactctgtctgg
attggtggctccatcctggcctccttgtccaccttccagcagatgtggatcagcaagcaa
gagtacgatgagtctggaccctccattgtccaccgcaaatgcttctaa

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