Geotrypetes seraphini (Gaboon caecilian): 117368843
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Entry
117368843 CDS
T09159
Symbol
ARHGEF1
Name
(RefSeq) rho guanine nucleotide exchange factor 1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04270
Vascular smooth muscle contraction
gsh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117368843 (ARHGEF1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117368843 (ARHGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117368843 (ARHGEF1)
Membrane trafficking [BR:
gsh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117368843 (ARHGEF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
Chaperone_III
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
117368843
NCBI-ProteinID:
XP_033818478
UniProt:
A0A6P8SQI5
LinkDB
All DBs
Position
11:complement(70717111..70924754)
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AA seq
1212 aa
AA seq
DB search
MDSEDTYNGSLVFGGHVKGTGSAMDIIGAEDEDFENDIDPAVDDQSSYFQSIELVKEHPA
YIMVFLQHVVLQFDCSPLMKHLGKPQLCYLHAELMKNLSAKESKKQFVDFYHTFLDKGAI
LRVSSTTKCFLIATRPDLIPKKTQKKYIQSIQSHQFQEINRQLEDFRAKRILGMTPGEPE
LMELESYRTNDKSILEAKEKQLAEQLLMRLDEMHPTISTDEEKSSTIFSAIVTYMKHLGV
KTKVADNKKSKRHFFRKKISGNKKGDELLKPKKGFSILDPTRWNRTGSELHYFDNKPSKV
DPEGEKSGMAERKSSTVKPPDRGELSVVLRKNTASSEGGETAAVAVAVHPPSEAADDEAG
SEGTPSLDATDAGRGAISVEQAVSGEHPVEDGGENERRRKRLCYISLILPHLRGSVLRCT
YQLGTCMLPLSPSYSLLRDEYVAVSAIYLFSLFLFPYPLTGCMTTSSTLILPLLLLPAVF
GMMMASILGGSRLPGRLGRSESLRVHERKRSQRGSAKGKQPRSRSDVDLDAAARATDLGE
KPLQPQQQKKQSLTPEPGGGGGGDSPQSFLPPQSEEIEPRVSELELDPPNWRNLAGPETL
LRLKKSEVRRQEVINELFITEHAHVRMLKVLHEVFYQPMLSVWIPHTELHNIFPSLEDLI
EVHALFLESLKNLRQENGCVMEIGDALLARFDGTEGGWFQKISSRFCSHQSFALEQLKGK
QKKDPRFNQFIQEAESKPQCRRLQLKDIIPIEMQRLTKYPLLLQNIAKCTEEVDEKHKVL
KAAECCRKILNHVNQQVKETENLLRLKDYQRRLDLSNLRQISDPLVNEFKNLDITAKNMV
HEGQLIWRVSRDKSVDVHVLLLDDILVLLQRQDDKLVLKCHSRTMTPTPDGKQMLSPIIR
LNSAITREVATDNKAFYVIFSWEDRAQIYELVAQSSSERKIWCSLISETAGSIKLPLTCQ
RKYLRGSSSGPSQRSPGSFQENLLTSSENGGSVKEALHIDEKEKDTSLEAGPFEQRCSQG
DEKIGKEDRSQDLTDFLLANGINIYRRNDLAEMQVAKAALDEVSMLKRLLVRGIRLSVDD
EFFLRRRQESPEHRQCMEPPRSELDTWMGTEGTEKVENGPDGEGGQDENWKYSASEEQDN
SKEENGASFPIQLEESTELLSTPIVLSQEQSEEADRRILLLEDQIKQLKVTEEDYYHLQK
VISMFTSQQSFI
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggactctgaggacacttataatggcagcctcgtgtttgggggccatgtgaagggaaca
gggtcagccatggatatcattggggctgaagacgaagactttgagaatgatatagaccca
gcagtggatgaccaaagcagctacttccagagcattgaactggtaaaagagcatccagcc
tacatcatggtcttcctgcaacatgtcgttctacagttcgactgcagtcctctgatgaaa
catcttggaaaacctcagctctgctacctccatgcagagctaatgaagaacctcagtgcc
aaagaaagcaagaagcagtttgtagatttttatcatacgtttttggataagggagcgatt
ctacgtgtatccagtaccaccaagtgtttccttatcgcaacaagaccagatctgattcct
aagaaaactcagaagaagtacatccagtcaattcagagccatcagttccaggagattaac
cgacaactggaggattttagggcaaagcggatactaggaatgactccaggggagccggag
ctgatggagctggagtcatatcgaacaaatgacaagagcattctggaggccaaggagaag
caactagcagaacagctgcttatgcgactggatgagatgcacccaactatttctacggac
gaggagaaaagctccaccatattcagtgctattgtgacttatatgaagcacctgggggtg
aagaccaaggtggctgacaacaagaagtctaaaaggcatttttttcggaaaaagatttca
gggaacaaaaagggagatgagctgttgaaaccaaagaaaggattcagtatcctggacccc
actcgctggaatcggaccgggtcagagttgcactattttgacaacaagccatcaaaggtt
gaccctgaaggtgaaaagtctggaatggctgagagaaaaagcagcactgtgaagcctcca
gaccgtggggaacttagcgtcgtgcttcggaagaatacagccagcagcgagggaggtgag
acagcggctgtggcagttgctgtccatccacccagtgaagctgcagatgatgaagcagga
tccgaggggacaccctcattggatgctactgatgctgggagaggggccatttctgtggag
caagcagtgtcaggggagcatccagttgaagatggaggagagaacgagagaaggagaaaa
aggttgtgctatatctcgctgatcttgccacacttaaggggctctgtcctaaggtgcaca
tatcaattaggtacatgcatgcttcccctctctccttcatactctcttctgagagatgag
tatgtagctgtctctgccatttatctattctctctttttctcttcccctatcccctcact
ggttgcatgactacttcttcaactctgattctccccctcctcctcctccctgctgtgttt
ggtatgatgatggcctccatcctgggggggagcaggctgccgggccgactggggcgctct
gagagcctgcgtgtgcatgagcggaagcgatcgcagcgtggctctgccaagggcaagcag
ccacggtcccggagtgatgtggacctagatgctgcagccagagccaccgatctgggagag
aagccattgcagccacagcagcagaagaagcagagcttgacccctgagccaggagggggt
gggggaggggactccccgcagtcctttctgcctccccagtctgaggagattgagccgcgt
gtttcggagctggagctggacccgcccaactggcgcaaccttgccggtcccgagaccctc
ctcagactgaagaaaagtgaagtcaggcggcaggaagtcatcaatgagctgtttatcaca
gagcatgctcatgtgcgcatgctgaaagtgcttcatgaagttttctaccaacccatgctc
agtgtctggatcccgcatacagaattgcacaatatcttcccaagtctggaggatctgatt
gaggtgcacgctctgttcctggaaagcctgaagaatctgcggcaggagaatggttgtgta
atggagataggagatgccctcctagctaggtttgatggcacagagggaggctggttccag
aagatttcctcccgattttgcagtcaccagtcctttgcactagagcagctgaaaggaaaa
cagaaaaaagaccctcgttttaaccaattcattcaggaagcagagagtaaacctcaatgc
cggcggctgcagctgaaggacattattcctattgaaatgcagagactgaccaagtaccct
ttgcttctgcagaacatagccaaatgtactgaagaggtagatgagaaacacaaggtacta
aaagctgctgagtgctgccggaagatcctcaatcatgtcaaccagcaagtgaaggaaact
gagaacttactgagacttaaggattatcagcgacgtctggacctgtcaaacctcaggcag
atcagtgatccccttgtgaatgaattcaagaatttggacatcactgctaagaatatggtc
catgagggacaactgatttggagagtttccagggacaaatctgttgatgtccatgtgctc
cttctggatgatatcttggtgcttttacaaagacaggatgacaaattggtgttaaaatgc
cacagccgaaccatgacccccaccccagatggtaaacagatgttgagccccatcatccga
cttaactctgccataaccagagaggtggccacagataacaaagccttctacgttatcttc
agctgggaggacagagcacagatctatgaactggtagcacagtccagttcagagagaaaa
atttggtgttcgctcatcagtgagactgcaggatcaataaaactaccactgacctgccag
cgtaaataccttcggggttcatccagtgggcccagtcagcgcagccctggatcttttcag
gagaaccttctgacttcctcggaaaatggaggttctgtgaaggaggcactgcatatagat
gagaaagagaaagatacatccctagaagctgggccctttgaacagagatgctcccaggga
gatgaaaagatagggaaagaggacagatcgcaggacctgacagacttcctgctcgctaac
ggcattaatatatatcgacggaatgatttggcagagatgcaggtggccaaggcagcccta
gatgaagtgtctatgttgaaaaggttacttgtgcggggcattcgcctttcggtggatgat
gagttctttctgaggagaaggcaagaatccccagagcacagacagtgtatggagccacca
cgctcagagttggatacctggatgggaacagagggcacagagaaagtagaaaatggacca
gatggagagggaggacaagatgagaattggaaatattcagcaagtgaagaacaagacaat
tctaaggaagagaatggggcaagctttcccatacagctcgaggagagtacagaacttctc
agcacccctatagtgctgtcccaagaacagtcagaggaagcagatagaagaatcctcctg
ctggaggaccaaattaaacaactgaaggtgactgaagaagactactaccacctgcaaaaa
gtgatatcaatgttcacttcgcagcagagtttcatatga
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integrated database retrieval system
