Geotrypetes seraphini (Gaboon caecilian): 117369056
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Entry
117369056 CDS
T09159
Symbol
NTHL1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117369056 (NTHL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117369056 (NTHL1)
Enzymes [BR:
gsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
117369056 (NTHL1)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117369056 (NTHL1)
Prokaryotic type
117369056 (NTHL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
HHH_8
HHH_3
Motif
Other DBs
NCBI-GeneID:
117369056
NCBI-ProteinID:
XP_033818862
UniProt:
A0A6P8SJZ9
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All DBs
Position
11:4452884..4477759
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AA seq
305 aa
AA seq
DB search
MRADARLAREPRANLCEFPAAMSFMLETAADQDVKQGIVMRRLPSRRASQRRKTLPVMYE
LSAETGGENDKEPNTKKSRWEPKNWKQQLDRIREMRKGRDSPVDLMGAAKCHDLDVAPQV
RRYQVLLSLMLSSQTKDEVTSAAMAQLRSKGLTVDSILQTDEEVLGKLIYPVGFWKRKAR
YIKQTTQILQEHYDSDIPSSVEELVKLPGVGPKMAHLIMDIAWNSVSGIGVDTHVHRISN
RLGWVNKETTFPEETRVALEEWLPRDLWSEINWLLVGFGQQVCLPVKPQCRRCLNQDICP
AAKRF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgacgcacgcttagcccgcgagcctcgggccaatctgtgcgagttcccggcg
gcaatgagctttatgctagagacggcggcagatcaggatgtgaaacaaggcatagtcatg
aggcgtctcccctcaaggagagcttcccagaggagaaaaactcttccagtcatgtacgag
ctttcagcagagactggaggggagaatgacaaagagcccaacacaaagaaatccagatgg
gagcccaagaactggaaacagcagctggatcgcattcgggagatgagaaagggcagagac
tcacctgtggacttaatgggagctgcaaagtgtcacgatcttgacgtagctccccaggtg
aggcgataccaggttttgctgtcactcatgctctccagtcagacgaaagatgaggtgact
tctgcagctatggcccagctgcggtctaaagggctgaccgtggatagcattctgcagacg
gatgaagaggtgctgggaaagctcatttacccggtcggattctggaagagaaaagctcgg
tacatcaagcagaccacccagatcttacaagagcactacgactccgacatccccagcagc
gtggaggagcttgtgaaactgccaggggtgggacccaaaatggctcacttaatcatggac
atcgcttggaacagcgtctcggggatcggggtcgacacacatgtgcacaggatttcaaac
aggcttggatgggtgaacaaggagacaacatttcctgaagaaacccgagtggcacttgaa
gaatggctgccaagggacctctggagtgagataaactggcttctggtgggctttgggcag
caggtctgcctccctgtgaaacctcagtgcagacgctgtctgaaccaggatatctgccct
gctgctaagagattctga
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