KEGG   Geotrypetes seraphini (Gaboon caecilian): 117369162
Entry
117369162         CDS       T09159                                 
Name
(RefSeq) actin, cytoplasmic 1-like
  KO
K05692  actin beta/gamma 1
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03082  ATP-dependent chromatin remodeling
gsh04145  Phagosome
gsh04210  Apoptosis
gsh04510  Focal adhesion
gsh04520  Adherens junction
gsh04530  Tight junction
gsh04810  Regulation of actin cytoskeleton
gsh04814  Motor proteins
gsh04820  Cytoskeleton in muscle cells
gsh05100  Bacterial invasion of epithelial cells
gsh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117369162
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117369162
  09143 Cell growth and death
   04210 Apoptosis
    117369162
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117369162
   04520 Adherens junction
    117369162
   04530 Tight junction
    117369162
  09142 Cell motility
   04814 Motor proteins
    117369162
   04820 Cytoskeleton in muscle cells
    117369162
   04810 Regulation of actin cytoskeleton
    117369162
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117369162
   05100 Bacterial invasion of epithelial cells
    117369162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gsh03021]
    117369162
   03019 Messenger RNA biogenesis [BR:gsh03019]
    117369162
   03036 Chromosome and associated proteins [BR:gsh03036]
    117369162
   03029 Mitochondrial biogenesis [BR:gsh03029]
    117369162
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gsh04812]
    117369162
   04147 Exosome [BR:gsh04147]
    117369162
Transcription machinery [BR:gsh03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     117369162
Messenger RNA biogenesis [BR:gsh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     117369162
Chromosome and associated proteins [BR:gsh03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     117369162
    NuA4 complex
     117369162
  Chromatin remodeling factors
   BAF complex
    117369162
   PBAF complex
    117369162
   GBAF(ncBAF) complex
    117369162
   SWR1 complex
    117369162
Mitochondrial biogenesis [BR:gsh03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    117369162
Cytoskeleton proteins [BR:gsh04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     117369162
Exosome [BR:gsh04147]
 Exosomal proteins
  Proteins found in most exosomes
   117369162
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 117369162
NCBI-ProteinID: XP_033819151
UniProt: A0A6P8SY82
LinkDB
Position
11:12521653..12549921
AA seq 375 aa
MEDDIAALVIDNGSGMCKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILSLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKLNREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFDQEMATAASSSSLEKSY
ELPDGQVITIGNERFRAPEALFQPSFLGMEISGIHETTYHSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITFMAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaggacgatattgctgcgctggttatcgacaatggctccggaatgtgcaagtccggg
tttgctggagacgacgctcctcgggcagtcttcccttccattgtagggcgcccaagacac
cagggtgtgatggtcggcatggggcagaaagacagctatgttggcgacgaagctcagagc
aagagaggaattctgagcctgaaataccccatcgagcatggtattgtcagcaactgggac
gacatggagaagatctggcaccacaccttctacaacgagcttcgtgttgctcctgaggaa
caccctgtcctccttacagaggctcctctgaaccccaagctcaacagagaaaagatgaca
cagatcatgtttgagacattcaacacgccagccatgtacgttgccatccaggctgttctg
tcgctgtatgcttctggtcgtaccacgggtatcgtgatggactctggcgatggtgttacc
cacacggtgcccatctacgaaggttatgccctgccccacgccatcctgcgtctggacttg
gctggccgtgacctgacagactacctcatgaagattctgaccgagagaggctacagcttc
accaccacagcagaaagagaaattgtgcgtgacatcaaagagaaactgtgctatgtcgcc
ttggactttgatcaggaaatggccacagctgcctcctcgtcctctctggaaaagagctac
gagcttcctgatggtcaggtgatcaccattggcaatgagaggttccgagctccagaggct
ctctttcaaccatccttccttggcatggagattagtggaattcatgaaaccacctaccac
tccatcatgaagtgtgatgtcgatatccgtaaggacctgtatgccaataccgtgctatcc
ggtggtaccaccatgtacccggggattgcagacaggatgcagaaggagatcacattcatg
gcacccagcacaatgaaaatcaagatcattgccccgcctgagcgcaagtactccgtctgg
atcggcggctccatcctggcctccctgtccaccttccagcagatgtggatcagcaagcag
gagtacgacgagtctggaccctccattgtccaccgcaaatgcttctag

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