Gordonia sihwensis: P5P27_09415
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Entry
P5P27_09415 CDS
T08972
Symbol
dop
Name
(GenBank) depupylase/deamidase Dop
KO
K20814
Pup amidohydrolase [EC:
3.5.1.119
]
Organism
gsi
Gordonia sihwensis
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gsi03051
]
P5P27_09415 (dop)
Enzymes [BR:
gsi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.119 Pup amidohydrolase
P5P27_09415 (dop)
Proteasome [BR:
gsi03051
]
Prokaryotic proteasome
Bacterial regulatory particles
P5P27_09415 (dop)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WFN94719
LinkDB
All DBs
Position
1960400..1961905
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AA seq
501 aa
AA seq
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MQRIIGTEVEYGISAPGDPSANPIMTSTQAVLAYAAAANVPRRDRRTRWDYEVESPMRDA
RGFDLGRSGGPAPIIDADEIGAANMILTNGARLYVDHAHPEYSAPEVTDPLDAVIWDKAG
ERVMEQAARHVASVPGAPRLQLYKNNIDGKGASYGTHENYLMRRDTPFDSIITGLMPFFA
SRQVICGSGRVGIGQRGEDSGYQLSQRADYIEVEVGLETTLKRGIINTRDEPHADPEKYR
RLHVIIGDANLAETATYLKVGTTALVLDLIEAGVDLSDLALAWPVEAVHAISHDPTLRTA
VALENGREMTGLALQREYLDRAQKFHDAHHSDDERAAHVLATWADVLDKLERDPMECADL
LDWPAKLRLLEGFRNREGLTWSASRLQLIDLQYSDVRLDKGLYNRLVARGSMKRMTTEDE
VMRAVETPPESTRAFFRGEAVRRFGADVAAASWDSVIFDLGRDSLVRIPMLEPLRGTAAH
VGELLDAADSAADLVDRLTAS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcatcatcggaaccgaagtcgagtacggcatctccgcgcccggcgatccgtcc
gcgaacccgatcatgacgtcaacccaggccgtcctggcgtacgccgccgcggcgaacgtg
ccgcgccgtgaccgccggacccgctgggactacgaggtcgagtcaccgatgcgcgatgcg
cgcggattcgacctcggccggagcggcggtccggcgcccatcatcgacgccgacgagatc
ggcgccgccaacatgatcctcaccaacggtgcccggctgtacgtcgatcacgcgcatccg
gagtattcggcacccgaggtgaccgacccgctcgacgcggtgatctgggacaaggcgggg
gagcgggtgatggagcaggcggctcggcatgtcgcgagcgttcccggcgcccctcggctg
cagttgtacaagaacaacatcgacggcaagggcgcctcgtacggcactcacgagaactac
ctgatgcgccgcgacacgccgttcgactcgatcatcaccggattgatgcccttcttcgcg
tcgcgtcaggtgatctgcggttcgggccgggtgggcatcggccagcgcggcgaggactcc
ggttaccagctgtcgcagcgtgccgactacatcgaggtcgaggtcggtctcgagaccaca
ctgaagcgggggatcatcaacacccgcgacgaaccgcacgccgatcccgagaagtaccgc
cgcctgcacgtcatcatcggtgacgcgaatctcgccgagacggcgacctacctcaaggtg
ggcaccacggcactcgtgctggacctgatcgaggccggggtggacctgtccgatctcgcg
ctggcctggcccgtcgaggcggttcacgcgatcagccacgacccgacgctgcgcacggcc
gtggcgctcgagaacggccgtgagatgaccgggctggccctgcaacgcgagtacctcgac
cgagcgcagaagttccacgacgcccaccactccgacgacgagcgcgccgcgcacgtgctg
gccacgtgggccgatgtcctcgacaagctcgaacgcgatcccatggagtgcgccgatctg
ctggactggccggccaaactgcggctgctggaggggttccgcaaccgcgagggactcacc
tggtcggcatcgcgtctgcagctcatcgacctgcagtactcggacgtccgtctcgacaag
ggtctctacaaccgtctggtggcacgcgggtccatgaaacgaatgaccaccgaggacgag
gtgatgcgcgcggtcgagacgccgccggagagcacacgggccttcttccgcggcgaagcc
gtccgccggttcggcgccgacgtcgccgccgccagctgggactcggtgatcttcgacctc
ggccgcgactcgctggtccggattcccatgctcgaaccgcttcgcggcaccgctgctcac
gtcggtgagctgctcgacgccgccgactcggccgccgatctggtcgaccgcctgaccgcg
tcgtga
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