Glycine soja (wild soybean): 114372651
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Entry
114372651 CDS
T06057
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04075
Plant hormone signal transduction
gsj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
114372651
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
114372651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsj03000
]
114372651
Transcription factors [BR:
gsj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
114372651
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_IRO3
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
114372651
NCBI-ProteinID:
XP_028186133
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All DBs
Position
10:complement(39304485..39309347)
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AA seq
691 aa
AA seq
DB search
MPLYELYRLAREKLGKETTSTRAPDQCSSPENDFFELVWENGQISSQGQSSRVRRSPSCK
SLPSHCLPSHSPKARDKDVGYGSYTRLGKFGDLDSGLNEIPMSVPSSEVDFCQDEDVLPW
LDYPSIDGSLQQEYGSDFLPASNSFTLLDKKSNGNMAFRDSQKTSEEQGNVFKGSSAGQV
ETARPKASSTSQLFPPSLHQCQTSFVSSRSRASDITENNNTSNANQDASYGKITHILSSS
SDFSNAKVQKCDPPMNSNGSSSTIMNFSHFARPAAMVRANLHSVGLKSGLSSSRSDSMEM
KNKGAAATSSNPPESILVDSSVECLKEPIIQCQQVVEQSKADVNSLLPKSVEQNAVPSKQ
SEPAGKESAAKIDLIPNQVPGDNGTKGQTAAEKSKEPAVASSSVCSGNGTDQGSEEPNQN
LKRKRKDTDDSECHSEDVEEESAGAKKTAGGRGGAGSKRSRAAEVHNLSERKRRDRINEK
MRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPAGMQHMPAP
HMAPFSPMGVGMHMGYGMGYGMGMPDMNGGSSRFPMIQVPQMQGTHIPVAHMSGSTAFHG
MARANPPGFGLPGQGHPMPMPRAPMFPFSGGQMPNVDPQVKQSTGGRDSTSQMPTQCEAA
AVGFEQSTLAHNNGHATKANDNGSVNPGTGR
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatatgagttataccggctggccagagagaagcttggtaaagaaactaccagc
acacgtgctcctgatcaatgttcctcgccagagaatgatttttttgagctggtttgggag
aacggtcagatttcgagccagggtcagtccagtagagttagaaggagcccctcttgcaag
agtttgccatctcactgcttaccatctcacagtccaaaggctagggataaagatgtagga
tatggtagctacacaaggttggggaaatttggggatttagactctggattaaatgaaatt
ccaatgtcggtgccatccagtgaagtggatttctgtcaagatgaagatgtgttaccttgg
ttggattatccatcaatagatggttctttgcaacaagagtatggttctgatttccttccc
gcctcaaacagttttactctattggataaaaaaagtaatggcaatatggcgtttagggat
tctcagaaaacttctgaagaacaagggaatgttttcaagggttcttcagctggacaggtt
gagactgccagacctaaagctagtagcaccagtcagttattccccccatcattgcatcag
tgtcaaacatcttttgtttcgtctagatccagagcatcagatataactgaaaataacaat
acgagtaatgcaaaccaggatgcgtcttatggcaaaattactcatattctatcttcctca
agtgatttttctaacgcaaaggtgcagaagtgtgatccacctatgaatagcaatggttcc
agttccaccataatgaatttctcccattttgcaaggcctgctgctatggtaagagctaat
cttcatagcgttggcctgaagtctggtttgtcttcatcaagatcagacagtatggaaatg
aagaataaaggtgctgctgcaactagcagcaatcctcctgaatcaattcttgttgattca
agtgttgaatgtttaaaggaaccgatcatacaatgccagcaggttgtggagcaatccaag
gctgatgtgaactctttgctgccaaaatctgttgaacagaatgctgtgccttctaagcag
tcagagcctgctggtaaagagagtgccgctaagattgatctaattcccaatcaagttcct
ggtgacaatggcactaaaggacagacagctgctgaaaaaagtaaggagccagcagtagcc
tcttcctctgtttgctctggcaatggtacagaccaaggttcagaagagccaaatcaaaat
ttgaagcgaaaaagaaaagacactgacgactctgagtgccatagtgaagatgttgaggaa
gaatcagctggtgctaaaaagacagctggtgggcgaggaggtgcaggttccaagagaagc
cgtgcagctgaagtgcataatctatctgaaaggaagcgaagagataggatcaatgagaag
atgcgtgcattacaagaactcataccaaattgcaataaggtggataaagcttcaatgctg
gatgaggcaattgagtatcttaaaacacttcagctccaagttcaaattatgtcaatggga
gctggtttatatatgcctccaatgatgttacctgcaggaatgcagcacatgcctgcacca
catatggctccattttcacctatgggtgttggcatgcatatgggatatggtatgggttat
gggatgggaatgcctgacatgaatggtggatcttcaagattccctatgattcaggtgccc
caaatgcaaggaactcatatccctgttgcacatatgtctggatctacagcttttcatggg
atggccagagcaaatcctccagggtttgggcttcctggacaaggacatcccatgccaatg
ccgcgagctcctatgtttcctttttcaggaggacaaatgccaaatgttgacccacaagtt
aagcaaagcactggtggccgtgactcaactagtcagatgcctacccagtgtgaagcagca
gctgttggatttgagcaatctactttggctcataataacggtcatgcaaccaaggctaat
gacaatggatctgttaatcctggaactggcagataa
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