Glycine soja (wild soybean): 114375284
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Entry
114375284 CDS
T06057
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114375284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114375284
Spliceosome [BR:
gsj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
114375284
Complex C
U5 SnRNP specific factors
114375284
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFL1
EFG_III
MMR_HSR1
Roc
EF-G_D2
Ras
Septin
K1-lyase_C
SRPRB
Motif
Other DBs
NCBI-GeneID:
114375284
NCBI-ProteinID:
XP_028188864
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All DBs
Position
11:complement(35667467..35672545)
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AA seq
986 aa
AA seq
DB search
MDDSLYDEFGNYIGPEIESDRDSDRDSDADDNPDDQSDAVGAAHSDGEDPSNGWMTTISD
ELENQVVLAEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRNIKFEVGVKDSST
YVSSQFLLGLMSNPTLVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFDSQSEKHMRYTDT
RIDEQERRISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAVLIVD
AAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTLEVINTHIS
AASSIAGGVQVVDPVAGNVCFASATAGWSFTLHSFAKLYGKLHGIPLEANKFASRLWGDY
YFHPDTRAFKKKPPASGGERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGVSLSNAA
YRLNVRPLLRLACSSVFGPASGFTDMLVQHIPSPRDAAIKKVDHIYAGPKDSSIYKAMAQ
CDSYGPVMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMTVKEV
TKLWVYQARDRMPVAEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLQFNTLSV
VKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKDLREL
YSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMVAEPLERGLAEDIENGVVST
DWSKKKLGDFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVNKDLMNAVKDSIV
QGFQWGAREGPLCDEPIRNVKFKIVDAKIATESLHRGSGQIIPTARRVAYSAFLMATPRL
MEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDL
RYHTQGQAFCMSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSEDV
SINKFFDEAMMVELAQQAADLHQQMM
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagcttgtacgacgagttcggcaactacatcggccccgagatcgagtccgac
cgcgactccgaccgcgactccgacgccgatgacaaccccgacgaccaatccgacgccgta
ggagccgcccactccgatggagaggacccgagcaacgggtggatgacgacaatctccgac
gagctggagaaccaggtggtgttagcagaggacaagaagtactaccccaccgcagaagag
gtgtacggcgaggacgtcgaaaccctagtcatggacgaggacgaacagcccctggagcaa
cccatcataaagcccgttagaaacataaaattcgaagtgggcgtgaaggactcctccacc
tacgtgtcctctcagttcctcctgggtctcatgtcaaaccctactttggttcgtaacgtg
gcactggtggggcacttgcagcacgggaagacggtcttcatggacatgctcgtggagcag
acgcaccacatgtccacgtttgattcgcagagtgagaagcacatgcggtataccgatacc
aggattgatgaacaggagaggaggatttcgatcaaggcggttcccatgtcgctcgtgctg
gaggatagcaattccaagtcctatttgtgtaacatcatggacacgcctggccatgttaac
ttctccgacgagatgaccgcggcgttgcggctcgctgatggcgctgtcttgattgtagat
gctgctgaaggagtcatggtaaacacagagagagcgatacgtcacgcaattcaggagcgg
ttgccgattgttgttgtaattaataaggttgacaggcttataactgagcttaagttgcca
ccgaaggatgcttatcataaactaaggcatactttggaagttattaatactcacatatct
gctgcctcctcgattgctggtggtgttcaagttgtggatccagttgctggaaatgtttgt
tttgctagtgctactgctggatggtcctttacgttgcattcctttgctaagttgtatggg
aagctgcatggaattcctttggaggctaataaatttgcttctcggctttggggagattat
tattttcatccggataccagagccttcaaaaagaaaccccctgccagtggaggggaacga
tcttttgtggagtttgtgctggagccactttacaagatatatagccaggtgatcggggaa
cataaaaagagtgtagagacaacacttgctgaacttggagtttctctaagtaatgcagcc
tacagattaaatgttaggcctttgctaaggttggcatgtagctcagtttttggtccagct
tcaggtttcaccgatatgcttgttcagcatataccttctccgagggatgctgcaattaag
aaagttgatcatatatatgctggtcctaaagactcatccatttacaaagccatggcacag
tgtgattcttatgggcccgtaatggttaatgtgaccaaattgtatccaaaatctgattgc
agtgtgtttgatgcctttggtagagtttatagtggtaagatacagacaggacagactgta
cgggtactaggagaaggatactcgccggatgatgaggaggacatgactgtaaaagaagta
acaaagttgtgggtttatcaagctcgtgataggatgccagtagctgaggctcctcccggt
tcttgggttctaattgaaggcgtggatgcttcaatcatgaaaaccgccactctttgtaat
gtggattatgatgaagatgtatatatattccggcctcttcagttcaatacactgtcagtg
gtaaaaacagctaccgagccattgaatccaagtgagttgccaaaaatggtggagggcctg
aggaaaataagcaagagttatcctcttgcagttactaaggttgaggaatctggggagcac
actattttagggactggtgagctgtacttggattcaattatgaaggacctgagagagctc
tattccgaagtagaagtcaaggtagcagatcctgttgtctcattttgtgaaactgttgtt
gaatcttcctcaatgaaatgttttgctgaaacaccaaacaagaagaataaaataactatg
gttgctgagccattagaaagaggtcttgcagaggacatagagaatggtgttgttagcact
gactggagtaaaaagaaactaggtgactttttccagactaaatatgactgggatcttctt
gctgcacggtcaatctgggcatttggccctgataagcagggtcccaatattctgttagat
gacacccttccaactgaagttaacaaggatctaatgaatgccgtgaaggattccattgtt
cagggatttcagtggggtgcacgagaagggcctctctgtgatgagcccatcagaaatgtt
aaattcaagattgttgatgcaaagattgctacagagtcacttcatcgggggtctggccag
atcattccaacagcacgacgagtggcctattcagctttcctcatggctactcctcgtctt
atggaaccagtatattatgtggagattcaaacaccaatagattgtgtatctgcaatttac
actgtattatctcgaaggcgtggacatgttactgctgatgttcctcagcctggcacccca
gcttatattgttaaggcatttttgcccgtgatagaatcttttggatttgaaacagacttg
agatatcatacacaaggtcaagcattttgcatgtcagtttttgatcattgggctattgtt
cctggagatcctctggataaaagcattgttttgcgcccacttgaacccgcacctattcag
catcttgcccgtgagtttatggtgaagacaagacgtagaaagggaatgagtgaggatgtg
agcataaataagttcttcgatgaggctatgatggtggaactggcacagcaggcagcagac
cttcatcaacaaatgatgtga
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